RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 COA7Q96BR5 231 aa22.85■■□□□ 1.25
TMEM53-201ENST00000372235 HAUS7Q99871 368 aa22.85■■□□□ 1.25
TMEM53-201ENST00000372235 DNAJC18Q9H819 358 aa22.85■■□□□ 1.25
TMEM53-201ENST00000372235 CABP5Q9NP86 173 aa22.85■■□□□ 1.25
TMEM53-201ENST00000372235 ZBTB21Q9ULJ3 1066 aa22.85■■□□□ 1.25
TMEM53-201ENST00000372235 ZNF532Q9HCE3 1301 aa22.84■■□□□ 1.25
TMEM53-201ENST00000372235 CDK5RAP2Q96SN8 1893 aa22.84■■□□□ 1.25
TMEM53-201ENST00000372235 TNPO2O14787 897 aaKnown RBP22.84■■□□□ 1.25
TMEM53-201ENST00000372235 HOXA7P31268 230 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-201ENST00000372235 IRX3P78415 501 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-201ENST00000372235 MTMR2Q13614 643 aa22.84■■□□□ 1.25
TMEM53-201ENST00000372235 TREML2Q5T2D2 321 aa22.84■■□□□ 1.25
TMEM53-201ENST00000372235 CCDC84Q86UT8 332 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-201ENST00000372235 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-201ENST00000372235 POTEFA5A3E0 1075 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 RRP1BQ14684 758 aaKnown RBP22.83■■□□□ 1.25
TMEM53-201ENST00000372235 CERKLQ49MI3 558 aaPredicted RBP22.83■■□□□ 1.25
TMEM53-201ENST00000372235 PRPF38BQ5VTL8 546 aaKnown RBP22.83■■□□□ 1.25
TMEM53-201ENST00000372235 AMOTL1Q8IY63 956 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 ANKRD13CQ8N6S4 541 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 BOLA2Q9H3K6 86 aa22.83■■□□□ 1.25
TMEM53-201ENST00000372235 LOC285556D6RIA3 1793 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 GDF11O95390 407 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 USP14P54578 494 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 USP17L2Q6R6M4 530 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 PXYLP1Q8TE99 480 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 DCTPP1Q9H773 170 aa22.82■■□□□ 1.24
TMEM53-201ENST00000372235 MYH1P12882 1939 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 SIPA1L1O43166 1804 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 CTGFP29279 349 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 IRF5Q13568 498 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 UBE3CQ15386 1083 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 ASCC2Q9H1I8 757 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-201ENST00000372235 ATP8A2Q9NTI2 1148 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 MCM9Q9NXL9 1143 aa22.81■■□□□ 1.24
TMEM53-201ENST00000372235 BIN2Q9UBW5 565 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-201ENST00000372235 TCRBV5S4A2TA0A5A2 114 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 GH2P01242 217 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 ADD2P35612 726 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 PRKCZQ05513 592 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 ECHDC1Q9NTX5 307 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 SWAP70Q9UH65 585 aa22.8■■□□□ 1.24
TMEM53-201ENST00000372235 EN2P19622 333 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-201ENST00000372235 LRRFIP1Q32MZ4 808 aaKnown RBP22.79■■□□□ 1.24
TMEM53-201ENST00000372235 FEZ1Q99689 392 aa22.79■■□□□ 1.24
TMEM53-201ENST00000372235 ECM2O94769 699 aaPredicted RBP22.78■■□□□ 1.24
TMEM53-201ENST00000372235 C12orf42Q96LP6 360 aa22.78■■□□□ 1.24
TMEM53-201ENST00000372235 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
TMEM53-201ENST00000372235 ADCY3O60266 1144 aa22.77■■□□□ 1.24
TMEM53-201ENST00000372235 FLT3LGP49771 235 aa22.77■■□□□ 1.24
TMEM53-201ENST00000372235 RAB3GAP1Q15042 981 aa22.77■■□□□ 1.24
TMEM53-201ENST00000372235 DCP1AQ9NPI6 582 aaPredicted RBP22.77■■□□□ 1.24
TMEM53-201ENST00000372235 MGAMO43451 1857 aa22.77■■□□□ 1.24
TMEM53-201ENST00000372235 PLCD1P51178 756 aa22.76■■□□□ 1.23
TMEM53-201ENST00000372235 GABPAQ06546 454 aa22.76■■□□□ 1.23
TMEM53-201ENST00000372235 LCORLQ8N3X6 602 aa22.76■■□□□ 1.23
TMEM53-201ENST00000372235 GPRC5AQ8NFJ5 357 aa22.76■■□□□ 1.23
TMEM53-201ENST00000372235 KIAA1683Q9H0B3 1180 aa22.76■■□□□ 1.23
TMEM53-201ENST00000372235 ZSWIM8A7E2V4 1837 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 GJB1P08034 283 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 HERVK_113P62684 666 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 JAG1P78504 1218 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 CCAR1Q8IX12 1150 aaKnown RBP22.75■■□□□ 1.23
TMEM53-201ENST00000372235 GCC1Q96CN9 775 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-201ENST00000372235 GABRQQ9UN88 632 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 HTTP42858 3142 aa22.75■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L15C9J2P7 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L13C9JLJ4 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L11C9JVI0 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L18D6R9N7 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L22D6RA61 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L17D6RBQ6 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L19D6RCP7 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L20D6RJB6 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 MBD4O95243 580 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 SHMT1P34896 483 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 USP17L24Q0WX57 530 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 SDR42E1Q8WUS8 393 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
TMEM53-201ENST00000372235 RNF208Q9H0X6 261 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 ARMT1Q9H993 441 aa22.74■■□□□ 1.23
TMEM53-201ENST00000372235 ERC2O15083 957 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 SMARCA5O60264 1052 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-201ENST00000372235 MYCP01106 439 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-201ENST00000372235 ZFYP08048 801 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-201ENST00000372235 CCL5P13501 91 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 MAPK4P31152 587 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 GJA8P48165 433 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 RRP1P56182 461 aaKnown RBP22.73■■□□□ 1.23
TMEM53-201ENST00000372235 TMEM179Q6ZVK1 233 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 CCDC17Q96LX7 622 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 P2RX7Q99572 595 aaKnown RBP22.73■■□□□ 1.23
TMEM53-201ENST00000372235 EMILIN3Q9NT22 766 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 TTC41PQ6P2S7 1318 aa22.73■■□□□ 1.23
TMEM53-201ENST00000372235 NAV1Q8NEY1 1877 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms