RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 DTHD1Q6ZMT9 781 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 ANGPTL2Q9UKU9 493 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 MRPS15P82914 257 aaKnown RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 BSPRYQ5W0U4 402 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 RINLQ6ZS11 566 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 SCYL1Q96KG9 808 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 RPS6KA1Q15418 735 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 C6orf50Q9HD87 102 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 RAD50Q92878 1312 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 NCBP1Q09161 790 aaKnown RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 POMGNT1Q8WZA1 660 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.292e-6■■■■□ 24.3
GTF3C4-201ENST00000372146 CFTRP13569 1480 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 TRAF5O00463 557 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 SDSP20132 328 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 NFE2L2Q16236 605 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 PAIP2BQ9ULR5 123 aaKnown RBP16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 SUFUQ9UMX1 484 aa16.89■□□□□ 0.29
GTF3C4-201ENST00000372146 SLC9C1Q4G0N8 1177 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 TRIM55Q9BYV6 548 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 USTQ9Y2C2 406 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 F6X3S4 739 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 GNL1P36915 607 aaPredicted RBP16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 CCDC152Q4G0S7 254 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 ECHDC1Q9NTX5 307 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 TXLNGQ9NUQ3 528 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 LOC102724159A0A0B4J2E5 919 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 KRT75O95678 551 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 PWP2Q15269 919 aaKnown RBP16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 FANCCQ00597 558 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 FLOT2Q14254 428 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 SLC4A1P02730 911 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 CCDC117Q8IWD4 279 aaPredicted RBP16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 TEKT2Q9UIF3 430 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 VWA3AA6NCI4 1184 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 MTX1Q13505 466 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
GTF3C4-201ENST00000372146 PTPRCP08575 1304 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 TRIM56Q9BRZ2 755 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 NME8Q8N427 588 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 GTPBP10A4D1E9 387 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 DYNC1I2Q13409 638 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 EFCAB8A8MWE9 144 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 NUP58Q9BVL2 599 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 STARD3NLO95772 234 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
GTF3C4-201ENST00000372146 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 SNX1Q13596 522 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 KLHL29Q96CT2 875 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 NSD3Q9BZ95 1437 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 TAF12Q16514 161 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 OCA2Q04671 838 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 GOLGA8QA0A0J9YX86 632 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 GOLGA8OA6NCC3 632 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 GOLGA8NF8WBI6 632 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 IGHDP01880 384 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 NPR1P16066 1061 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 KRIT1O00522 736 aa16.86■□□□□ 0.29
GTF3C4-201ENST00000372146 BAG3O95817 575 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 DEUP1Q05D60 604 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 MAPK8IP1Q9UQF2 711 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 BIRC3Q13489 604 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 FAM186BQ8IYM0 893 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 CAPN11Q9UMQ6 739 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 FLOT1O75955 427 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 KRT79Q5XKE5 535 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 ICE2Q659A1 982 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms