RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TUBBP07437 444 aa13.15□□□□□ -0.31
COPA-202ENST00000368069 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.31
COPA-202ENST00000368069 APOA5Q6Q788 366 aa13.15□□□□□ -0.31
COPA-202ENST00000368069 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.31
COPA-202ENST00000368069 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.315e-8■□□□□ 9.7
COPA-202ENST00000368069 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.31
COPA-202ENST00000368069 TNKSO95271 1327 aa13.15□□□□□ -0.31
COPA-202ENST00000368069 IVLP07476 585 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 GABPB1Q06547 395 aaPredicted RBP13.14□□□□□ -0.31
COPA-202ENST00000368069 NELFBQ8WX92 580 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 MICALCLQ6ZW33 695 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
COPA-202ENST00000368069 CETN2P41208 172 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 CCDC24Q8N4L8 307 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
COPA-202ENST00000368069 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
COPA-202ENST00000368069 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 USP17L21D6R901 530 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 ETF1P62495 437 aaKnown RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 GYG1P46976 350 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
COPA-202ENST00000368069 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
COPA-202ENST00000368069 OPA1O60313 960 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 PPP1R2P41236 205 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TXKP42681 527 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TFAP4Q01664 338 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TUBB2AQ13885 445 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TUBB2BQ9BVA1 445 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 CPS1P31327 1500 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 GSTTP1A0A1W2PQM5 241 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TRAF5O00463 557 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 JAKMIP2Q96AA8 810 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■■■ 50.1
COPA-202ENST00000368069 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
COPA-202ENST00000368069 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 ADD2P35612 726 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 REREQ9P2R6 1566 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
COPA-202ENST00000368069 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
COPA-202ENST00000368069 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
COPA-202ENST00000368069 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
COPA-202ENST00000368069 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 EIF6P56537 245 aaKnown RBP13.11□□□□□ -0.31
COPA-202ENST00000368069 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.31
COPA-202ENST00000368069 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 H7C1W4 665 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 PPP6R2O75170 966 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 UFL1O94874 794 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 TRIML1Q8N9V2 468 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 PPP1R13BQ96KQ4 1090 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
COPA-202ENST00000368069 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
COPA-202ENST00000368069 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
COPA-202ENST00000368069 MYZAPP0CAP1 466 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
COPA-202ENST00000368069 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 AIFM3Q96NN9 605 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 CHRNDQ07001 517 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms