RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CYP2D6P10635 497 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 DIS3L2Q8IYB7 885 aaKnown RBP26.08■■□□□ 1.77
LDB1-201ENST00000361198 PPP6R2O75170 966 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 SERPINB2P05120 415 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 PFKFB1P16118 471 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 CRY2Q49AN0 593 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 TMED8Q6PL24 325 aaPredicted RBP26.08■■□□□ 1.77
LDB1-201ENST00000361198 NRBP1Q9UHY1 535 aa26.08■■□□□ 1.77
LDB1-201ENST00000361198 ZNF202O95125 648 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 PPP2R5BQ15173 497 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 DRC7Q8IY82 874 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 WDR66Q8TBY9 1149 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 MYH6P13533 1939 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 ORC4O43929 436 aa26.07■■□□□ 1.76
LDB1-201ENST00000361198 SAFBQ15424 915 aaKnown RBP eCLIP26.07■■□□□ 1.76
LDB1-201ENST00000361198 ARPP21Q9UBL0 812 aaPredicted RBP26.07■■□□□ 1.76
LDB1-201ENST00000361198 LDHBP07195 334 aaKnown RBP26.06■■□□□ 1.76
LDB1-201ENST00000361198 GPSM2P81274 684 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 TROAPQ12815 778 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 GRIK5Q16478 980 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 SLC27A3Q5K4L6 730 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 CATIPQ7Z7H3 387 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 RNF26Q9BY78 433 aaPredicted RBP26.06■■□□□ 1.76
LDB1-201ENST00000361198 LAMB1P07942 1786 aa26.06■■□□□ 1.76
LDB1-201ENST00000361198 SBK1Q52WX2 424 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 JMYQ8N9B5 988 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 ANO10Q9NW15 660 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 NMT2O60551 498 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 TRIM37O94972 964 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 ST5P78524 1137 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 LRMPQ12912 555 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 FAM47AQ5JRC9 791 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 ZNF804AQ7Z570 1209 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.05■■□□□ 1.76
LDB1-201ENST00000361198 KIAA1468Q9P260 1216 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 CLIP2Q9UDT6 1046 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 KIAA1551Q9HCM1 1747 aa26.05■■□□□ 1.76
LDB1-201ENST00000361198 GOLGA6L19H0YKK7 550 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 FUT2Q10981 343 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 SHC4Q6S5L8 630 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 ZNF710Q8N1W2 664 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 MRFAP1L1Q96HT8 127 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 FOXP1Q9H334 677 aaPredicted RBP26.04■■□□□ 1.76
LDB1-201ENST00000361198 MCM9Q9NXL9 1143 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 DLEC1Q9Y238 1755 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 TOB1P50616 345 aaPredicted RBP26.04■■□□□ 1.76
LDB1-201ENST00000361198 NR5A1Q13285 461 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 SLC4A8Q2Y0W8 1093 aa26.04■■□□□ 1.76
LDB1-201ENST00000361198 PLEKHA8P1O95397 391 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 USP17L8P0C7I0 530 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 DIXDC1Q155Q3 683 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 C15orf52Q6ZUT6 534 aaKnown RBP26.03■■□□□ 1.76
LDB1-201ENST00000361198 SHISA4Q96DD7 197 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 CLIC6Q96NY7 704 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 PKN1Q16512 942 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 MKRN1Q9UHC7 482 aaKnown RBP26.03■■□□□ 1.76
LDB1-201ENST00000361198 HPSEQ9Y251 543 aa26.03■■□□□ 1.76
LDB1-201ENST00000361198 SLC3A2P08195 630 aaKnown RBP26.02■■□□□ 1.76
LDB1-201ENST00000361198 KRT27Q7Z3Y8 459 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 OXER1Q8TDS5 423 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 FBXW7Q969H0 707 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 hCG_1642624A0A1W2PR95 340 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 UFL1O94874 794 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 AKAP17AQ02040 695 aaKnown RBP26.02■■□□□ 1.76
LDB1-201ENST00000361198 DDR1Q08345 913 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 CACTINQ8WUQ7 758 aaKnown RBP26.02■■□□□ 1.76
LDB1-201ENST00000361198 TSC1Q92574 1164 aa26.02■■□□□ 1.76
LDB1-201ENST00000361198 CALM1P0DP23 149 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 CALM2P0DP24 149 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 CALM3P0DP25 149 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 SYKP43405 635 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 PDE4BQ07343 736 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 BRWD3Q6RI45 1802 aa26.01■■□□□ 1.75
LDB1-201ENST00000361198 SH3RF3Q8TEJ3 882 aaPredicted RBP26.01■■□□□ 1.75
LDB1-201ENST00000361198 RBM17Q96I25 401 aaKnown RBP26.01■■□□□ 1.75
LDB1-201ENST00000361198 RBM28Q9NW13 759 aaKnown RBP26.01■■□□□ 1.75
LDB1-201ENST00000361198 RIOK3O14730 519 aaKnown RBP26■■□□□ 1.75
LDB1-201ENST00000361198 DDAH1O94760 285 aa26■■□□□ 1.75
LDB1-201ENST00000361198 CCDC144BQ3MJ40 725 aa26■■□□□ 1.75
LDB1-201ENST00000361198 DHX40Q8IX18 779 aaKnown RBP26■■□□□ 1.75
LDB1-201ENST00000361198 PRPF3O43395 683 aaKnown RBP26■■□□□ 1.75
LDB1-201ENST00000361198 USP5P45974 858 aa26■■□□□ 1.75
LDB1-201ENST00000361198 RESP18Q5W5W9 173 aa26■■□□□ 1.75
LDB1-201ENST00000361198 CEP57L1Q8IYX8 460 aa26■■□□□ 1.75
LDB1-201ENST00000361198 CD209Q9NNX6 404 aa26■■□□□ 1.75
LDB1-201ENST00000361198 VPS54Q9P1Q0 977 aa26■■□□□ 1.75
LDB1-201ENST00000361198 V9GY48 417 aaPredicted RBP26■■□□□ 1.75
LDB1-201ENST00000361198 CUTAO60888 179 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 IGSF3O75054 1194 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 RILPL1Q5EBL4 403 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 BAZ2BQ9UIF8 2168 aaKnown RBP25.99■■□□□ 1.75
LDB1-201ENST00000361198 FAM237AA0A1B0GTK4 181 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 TSPY2A6NKD2 308 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 BECN2A8MW95 431 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 CTIFO43310 598 aaKnown RBP25.99■■□□□ 1.75
LDB1-201ENST00000361198 ATP2B4P23634 1241 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 C12orf60Q5U649 245 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 PROM2Q8N271 834 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 TIGD1Q96MW7 591 aa25.99■■□□□ 1.75
LDB1-201ENST00000361198 GGA1Q9UJY5 639 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms