RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CCDC150Q8NCX0 1101 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 KIF18AQ8NI77 898 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 COA7Q96BR5 231 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 USP25Q9UHP3 1055 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 SCAF8Q9UPN6 1271 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PATL2C9JE40 543 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 FLOT1O75955 427 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 LRRC24Q50LG9 513 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 DACT1Q9NYF0 836 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 AKAP12Q02952 1782 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 USO1O60763 962 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 IDEP14735 1019 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 CETN2P41208 172 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PDCL2Q8N4E4 241 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 TAF4BQ92750 862 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 TDRD3Q9H7E2 651 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PKD2L1Q9P0L9 805 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 COL5A2P05997 1499 aaPredicted RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 ZAP70P43403 619 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 SPOUT1Q5T280 376 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 TTC16Q8NEE8 873 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PNMA3Q9UL41 463 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 KIF5CO60282 957 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 TUBB4AP04350 444 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PARP1P09874 1014 aaKnown RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 STAT6P42226 847 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 MTIF2P46199 727 aaKnown RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 SCARF1Q14162 830 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 KCTD2Q14681 263 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 CERKLQ49MI3 558 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PUS3Q9BZE2 481 aaKnown RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 EXOC1Q9NV70 894 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 BSDC1Q9NW68 430 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 GINS2Q9Y248 185 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PRDM1O75626 825 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 ADCY5O95622 1261 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 NT5C2P49902 561 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 DRC1Q96MC2 740 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 GBP3Q9H0R5 595 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PSMD14O00487 310 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 NOP56O00567 594 aaKnown RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PSMA7O14818 248 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 PDE8BO95263 885 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 SLC1A4P43007 532 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 SREBF2Q12772 1141 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 UBE3CQ15386 1083 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 USP37Q86T82 979 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 ANKRD35Q8N283 1001 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 ZNF274Q96GC6 653 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 CRAMP1Q96RY5 1269 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 ROBO1Q9Y6N7 1651 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 TNS2Q63HR2 1409 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 ZNF532Q9HCE3 1301 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 MYCLP12524 364 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 KRT79Q5XKE5 535 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-201ENST00000360299 IQUBQ8NA54 791 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 CAMKK2Q96RR4 588 aa7.97□□□□□ -1.13
RAB5B-201ENST00000360299 DLG5Q8TDM6 1919 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 SPDYE3A6NKU9 549 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 B4E1Z4 1266 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 TBCAO75347 108 aaKnown RBP7.96□□□□□ -1.13
RAB5B-201ENST00000360299 CAMTA2O94983 1202 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 GDF11O95390 407 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 GSPT1P15170 499 aaKnown RBP7.96□□□□□ -1.13
RAB5B-201ENST00000360299 GIMAP6Q6P9H5 292 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 ARPP21Q9UBL0 812 aaPredicted RBP7.96□□□□□ -1.13
RAB5B-201ENST00000360299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.96□□□□□ -1.13
RAB5B-201ENST00000360299 DISP2A7MBM2 1401 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 BACH1O14867 736 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 EIF3JO75822 258 aaKnown RBP7.96□□□□□ -1.13
RAB5B-201ENST00000360299 CCDC172P0C7W6 258 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 HS1BP3Q53T59 392 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 JAKMIP3Q5VZ66 844 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 STK24Q9Y6E0 443 aa7.96□□□□□ -1.13
RAB5B-201ENST00000360299 CSPG5O95196 566 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
RAB5B-201ENST00000360299 CCDC40Q4G0X9 1142 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 AKNAD1Q5T1N1 836 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 UBXN4Q92575 508 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 ADARB2Q9NS39 739 aaKnown RBP7.96□□□□□ -1.14
RAB5B-201ENST00000360299 NDUFB9Q9Y6M9 179 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 ZHX2Q9Y6X8 837 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 PNPLA7Q6ZV29 1317 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 BIN1O00499 593 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 MCM3P25205 808 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 CRKP46108 304 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 FCHSD1Q86WN1 690 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 ITSN1Q15811 1721 aa7.96□□□□□ -1.14
RAB5B-201ENST00000360299 TNNT3P45378 269 aaPredicted RBP7.95□□□□□ -1.14
RAB5B-201ENST00000360299 ABCB5Q2M3G0 1257 aa7.95□□□□□ -1.14
RAB5B-201ENST00000360299 RRAGBQ5VZM2 374 aa7.95□□□□□ -1.14
RAB5B-201ENST00000360299 CCDC129Q6ZRS4 1044 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms