RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 LARGE1O95461 756 aa25.72■■□□□ 1.71
HOXA4-201ENST00000360046 TSPY3P0CV98 308 aa25.72■■□□□ 1.71
HOXA4-201ENST00000360046 TSPY8P0CW00 308 aa25.72■■□□□ 1.71
HOXA4-201ENST00000360046 NT5C2P49902 561 aa25.72■■□□□ 1.71
HOXA4-201ENST00000360046 GGA3Q9NZ52 723 aa25.72■■□□□ 1.71
HOXA4-201ENST00000360046 RASA3Q14644 834 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 ME3Q16798 604 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 USP50Q70EL3 339 aaPredicted RBP25.71■■□□□ 1.71
HOXA4-201ENST00000360046 IGDCC4Q8TDY8 1250 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 SH2B1Q9NRF2 756 aaPredicted RBP25.71■■□□□ 1.71
HOXA4-201ENST00000360046 FOXD4L1Q9NU39 408 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 TNKSO95271 1327 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 FAM196BA6NMK8 535 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 WTAPQ15007 396 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 EAPPQ56P03 285 aaPredicted RBP25.71■■□□□ 1.71
HOXA4-201ENST00000360046 NFXL1Q6ZNB6 911 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 ZSCAN10Q96SZ4 725 aaPredicted RBP25.71■■□□□ 1.71
HOXA4-201ENST00000360046 MTA3Q9BTC8 594 aa25.71■■□□□ 1.71
HOXA4-201ENST00000360046 POTECB2RU33 542 aa25.7■■□□□ 1.7
HOXA4-201ENST00000360046 SLURP2P0DP57 97 aa25.7■■□□□ 1.7
HOXA4-201ENST00000360046 STK3Q13188 491 aa25.7■■□□□ 1.7
HOXA4-201ENST00000360046 APOBEC3FQ8IUX4 373 aaKnown RBP25.7■■□□□ 1.7
HOXA4-201ENST00000360046 FOXP4Q8IVH2 680 aaPredicted RBP25.7■■□□□ 1.7
HOXA4-201ENST00000360046 TAF1DQ9H5J8 278 aaPredicted RBP25.7■■□□□ 1.7
HOXA4-201ENST00000360046 LY9Q9HBG7 655 aa25.7■■□□□ 1.7
HOXA4-201ENST00000360046 KLF18A0A0U1RQI7 1052 aa25.69■■□□□ 1.7
HOXA4-201ENST00000360046 SHMT1P34896 483 aa25.69■■□□□ 1.7
HOXA4-201ENST00000360046 ZNF526Q8TF50 670 aaPredicted RBP25.69■■□□□ 1.7
HOXA4-201ENST00000360046 DNAJC18Q9H819 358 aa25.69■■□□□ 1.7
HOXA4-201ENST00000360046 RRAGCQ9HB90 399 aa25.69■■□□□ 1.7
HOXA4-201ENST00000360046 NMT2O60551 498 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 DCPSQ96C86 337 aaKnown RBP25.68■■□□□ 1.7
HOXA4-201ENST00000360046 DEFB129Q9H1M3 183 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 SENP2Q9HC62 589 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 LIFRP42702 1097 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 CDAN1Q8IWY9 1227 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 ENAHQ8N8S7 591 aaPredicted RBP25.68■■□□□ 1.7
HOXA4-201ENST00000360046 NECAB1Q8N987 351 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 BRPF3Q9ULD4 1205 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 WDR90Q96KV7 1748 aa25.68■■□□□ 1.7
HOXA4-201ENST00000360046 SCN4AP35499 1836 aa25.67■■□□□ 1.7
HOXA4-201ENST00000360046 CCDC69A6NI79 296 aa25.67■■□□□ 1.7
HOXA4-201ENST00000360046 CCDC83Q8IWF9 413 aa25.67■■□□□ 1.7
HOXA4-201ENST00000360046 SLKQ9H2G2 1235 aaPredicted RBP25.67■■□□□ 1.7
HOXA4-201ENST00000360046 TAOK2Q9UL54 1235 aa25.67■■□□□ 1.7
HOXA4-201ENST00000360046 GOLGA8BA8MQT2 603 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 CUL4AQ13619 759 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 SEC23AQ15436 765 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 IFIT1BQ5T764 474 aaKnown RBP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 PNMA8AQ86V59 439 aaPredicted RBP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 HERC5Q9UII4 1024 aaKnown RBP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 EVCP57679 992 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 SGMS1Q86VZ5 419 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 METTL16Q86W50 562 aaKnown RBP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 TMTC2Q8N394 836 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 NEDD1Q8NHV4 660 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 ZNF274Q96GC6 653 aaPredicted RBP25.66■■□□□ 1.7
HOXA4-201ENST00000360046 CLEC11AQ9Y240 323 aa25.66■■□□□ 1.7
HOXA4-201ENST00000360046 AKR1B1P15121 316 aa25.65■■□□□ 1.7
HOXA4-201ENST00000360046 VEGFAP15692 232 aaPredicted RBP25.65■■□□□ 1.7
HOXA4-201ENST00000360046 PDIA3P30101 505 aaKnown RBP25.65■■□□□ 1.7
HOXA4-201ENST00000360046 RAB11FIP4Q86YS3 637 aa25.65■■□□□ 1.7
HOXA4-201ENST00000360046 SLC12A7Q9Y666 1083 aa25.65■■□□□ 1.7
HOXA4-201ENST00000360046 MPHOSPH10O00566 681 aaKnown RBP25.64■■□□□ 1.7
HOXA4-201ENST00000360046 CERKLQ49MI3 558 aaPredicted RBP25.64■■□□□ 1.7
HOXA4-201ENST00000360046 CCDC178Q5BJE1 867 aa25.64■■□□□ 1.7
HOXA4-201ENST00000360046 IL17RBQ9NRM6 502 aa25.64■■□□□ 1.7
HOXA4-201ENST00000360046 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.7
HOXA4-201ENST00000360046 PITPNM2Q9BZ72 1349 aa25.64■■□□□ 1.7
HOXA4-201ENST00000360046 PFKFB2O60825 505 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 POLR2AP24928 1970 aaKnown RBP25.63■■□□□ 1.69
HOXA4-201ENST00000360046 PRAMEF18Q5VWM3 479 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 TATDN1Q6P1N9 297 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 APOA5Q6Q788 366 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 SYNE3Q6ZMZ3 975 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 SULF1Q8IWU6 871 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 GTF3C6Q969F1 213 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 TEPSINQ96N21 525 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 TCP11L1Q9NUJ3 509 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 PLIN4Q96Q06 1357 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 CCT2P78371 535 aaKnown RBP25.63■■□□□ 1.69
HOXA4-201ENST00000360046 MIGA2Q7L4E1 593 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 MICU3Q86XE3 530 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 ZC3H15Q8WU90 426 aaKnown RBP25.63■■□□□ 1.69
HOXA4-201ENST00000360046 CCDC17Q96LX7 622 aa25.63■■□□□ 1.69
HOXA4-201ENST00000360046 ST3GAL1Q11201 340 aa25.62■■□□□ 1.69
HOXA4-201ENST00000360046 INTS4Q96HW7 963 aaKnown RBP25.62■■□□□ 1.69
HOXA4-201ENST00000360046 MYL10Q9BUA6 226 aa25.62■■□□□ 1.69
HOXA4-201ENST00000360046 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
HOXA4-201ENST00000360046 ZBTB43O43298 467 aa25.61■■□□□ 1.69
HOXA4-201ENST00000360046 SCRN1Q12765 414 aa25.61■■□□□ 1.69
HOXA4-201ENST00000360046 NBPF12Q5TAG4 269 aaPredicted RBP25.61■■□□□ 1.69
HOXA4-201ENST00000360046 DGKHQ86XP1 1220 aa25.61■■□□□ 1.69
HOXA4-201ENST00000360046 NCOA5Q9HCD5 579 aaKnown RBP25.61■■□□□ 1.69
HOXA4-201ENST00000360046 NMRK2Q9NPI5 230 aa25.61■■□□□ 1.69
HOXA4-201ENST00000360046 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.61■■□□□ 1.69
HOXA4-201ENST00000360046 GDF11O95390 407 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 RXRAP19793 462 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 RCSD1Q6JBY9 416 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms