RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 SHMT1P34896 483 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GTF2A2P52657 109 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 MAP2K1Q02750 393 aaPredicted RBP22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ALX1Q15699 326 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 TATDN1Q6P1N9 297 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 C16orf86Q6ZW13 317 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 REM2Q8IYK8 340 aaPredicted RBP22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 TOMM22Q9NS69 142 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GINM1Q9NU53 330 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 CTNNA3Q9UI47 895 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 SIPA1L1O43166 1804 aa22.8■■□□□ 1.24
HLA-DRB1-201ENST00000360004 USP17L5A8MUK1 530 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GH2P01242 217 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 FGAP02671 866 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GABPAQ06546 454 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 SNAPC2Q13487 334 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 RAB3GAP1Q15042 981 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 DSCC1Q9BVC3 393 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ZBTB21Q9ULJ3 1066 aa22.79■■□□□ 1.24
HLA-DRB1-201ENST00000360004 SGSM2O43147 1006 aa22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 RRP1BQ14684 758 aaKnown RBP22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 CCDC17Q96LX7 622 aa22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 TBC1D2Q9BYX2 928 aa22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
HLA-DRB1-201ENST00000360004 DOCK1Q14185 1865 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 TRIM75PA6NK02 468 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ZNF213O14771 459 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 IRF6O14896 467 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 GJA5P36382 358 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 HAND2P61296 217 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 OTUD7BQ6GQQ9 843 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 CCDC84Q86UT8 332 aaPredicted RBP22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ZIC5Q96T25 663 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ESYT1Q9BSJ8 1104 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ZMYM6O95789 1325 aa22.77■■□□□ 1.24
HLA-DRB1-201ENST00000360004 ROBO3Q96MS0 1386 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 CCL15-CCL14A0A0B4J2E2 113 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 SMIM22K7EJ46 135 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 FOXP2O15409 715 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 CETPP11597 493 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 INHBEP58166 350 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 CCL15Q16663 113 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 IMMTQ16891 758 aaKnown RBP22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 FEZ1Q99689 392 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ANO2Q9NQ90 1003 aa22.76■■□□□ 1.23
HLA-DRB1-201ENST00000360004 PRDM1O75626 825 aa22.75■■□□□ 1.23
HLA-DRB1-201ENST00000360004 TMEM179Q6ZVK1 233 aa22.75■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ZNF280CQ8ND82 737 aa22.75■■□□□ 1.23
HLA-DRB1-201ENST00000360004 IL25Q9H293 177 aa22.75■■□□□ 1.23
HLA-DRB1-201ENST00000360004 LAMB1P07942 1786 aa22.75■■□□□ 1.23
HLA-DRB1-201ENST00000360004 AKR1B1P15121 316 aa22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 SPP2Q13103 211 aa22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 SHROOM1Q2M3G4 852 aaPredicted RBP22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 RRP12Q5JTH9 1297 aaKnown RBP22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 GADL1Q6ZQY3 521 aa22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 JMYQ8N9B5 988 aa22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 RNF41Q9H4P4 317 aaPredicted RBP22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 U3KPZ7 1027 aaPredicted RBP22.74■■□□□ 1.23
HLA-DRB1-201ENST00000360004 CXCL11O14625 94 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 TSPY3P0CV98 308 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 TSPY8P0CW00 308 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 SEPT2Q15019 361 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 AFG3L2Q9Y4W6 797 aa22.73■■□□□ 1.23
HLA-DRB1-201ENST00000360004 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 RASA1P20936 1047 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 JAG1P78504 1218 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 MFSD6Q6ZSS7 791 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 TMOD4Q9NZQ9 345 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ANAPC4Q9UJX5 808 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 KCNH4Q9UQ05 1017 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ATAD5Q96QE3 1844 aa22.72■■□□□ 1.23
HLA-DRB1-201ENST00000360004 MYH8P13535 1937 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 TSPY2A6NKD2 308 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 PTH1RQ03431 593 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ICA1Q05084 483 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 FASTKD5Q7L8L6 764 aaKnown RBP22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 ARHGEF10LQ9HCE6 1279 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 THSD7BQ9C0I4 1608 aa22.71■■□□□ 1.23
HLA-DRB1-201ENST00000360004 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 ALDH1A1P00352 501 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 TM4SF4P48230 202 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 MTMR2Q13614 643 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 ZYXQ15942 572 aaKnown RBP22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 BRI3BPQ8WY22 251 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 MS4A4AQ96JQ5 239 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 WDR18Q9BV38 432 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 SH2D4AQ9H788 454 aa22.7■■□□□ 1.22
HLA-DRB1-201ENST00000360004 CA12O43570 354 aa22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 TRPA1O75762 1119 aa22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 PCP11498 1178 aaKnown RBP22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 HMGCS2P54868 508 aa22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 TFAP4Q01664 338 aa22.69■■□□□ 1.22
HLA-DRB1-201ENST00000360004 FAM47AQ5JRC9 791 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms