RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 JDP2Q8WYK2 163 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 GMCL1Q96IK5 515 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 CAPN10Q9HC96 672 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ATP6V0A2Q9Y487 856 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 PCDHGB3Q9Y5G1 929 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 MON2Q7Z3U7 1717 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 PNMA6FA0A0J9YX94 578 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 ABHD14A-ACY1A0A1B0GW23 586 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TIMM44O43615 452 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 RHOBTB3O94955 611 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 IL11P20809 199 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 FNDC3BQ53EP0 1204 aaKnown RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 INTS3Q68E01 1043 aaKnown RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 CDCA2Q69YH5 1023 aaPredicted RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 TMTC1Q8IUR5 882 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 BHLHE41Q9C0J9 482 aaPredicted RBP2.56□□□□□ -2
SMARCAD1-202ENST00000359052 FAM8A1Q9UBU6 413 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 HPS5Q9UPZ3 1129 aa2.56□□□□□ -2
SMARCAD1-202ENST00000359052 KIF1BO60333 1816 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 DDX11L8A8MPP1 907 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 FAM153BP0C7A2 387 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 SV2BQ7L1I2 683 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 HERVK_113Q902F9 699 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 TAAR9Q96RI9 348 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 KIF2CQ99661 725 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 DNM3Q9UQ16 869 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 TMX2Q9Y320 296 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 SLIT1O75093 1534 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 AKNAQ7Z591 1439 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ATP10BO94823 1461 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ERCC6Q03468 1493 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 GOLGA3Q08378 1498 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ATAD2Q6PL18 1390 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 DDX46Q7L014 1031 aaKnown RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 KIAA1958Q8N8K9 716 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 PPP1R13LQ8WUF5 828 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 CCDC74AQ96AQ1 378 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 RBM33Q96EV2 1170 aaKnown RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ZC3H10Q96K80 434 aaKnown RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 NUDT12Q9BQG2 462 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 CRISPLD1Q9H336 500 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 SERINC1Q9NRX5 453 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 KIAA1468Q9P260 1216 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 SCOCQ9UIL1 159 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 HIF3AQ9Y2N7 669 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 SETBP1Q9Y6X0 1596 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ARHGAP23Q9P227 1491 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 A0A1W2PQU0 124 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 RNASEH2AO75792 299 aaKnown RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 CDC27P30260 824 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 CAP2P40123 477 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ODF1Q14990 250 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ESCO1Q5FWF5 840 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 ARSIQ5FYB1 569 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 INTS11Q5TA45 600 aaKnown RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 COL13A1Q5TAT6 717 aaPredicted RBP2.55□□□□□ -2
SMARCAD1-202ENST00000359052 LRFN3Q9BTN0 628 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 EEA1Q15075 1411 aa2.55□□□□□ -2
SMARCAD1-202ENST00000359052 C19orf81C9J6K1 198 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 FAM200BP0CF97 657 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 ZNF865P0CJ78 1059 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 YBX1P67809 324 aaKnown RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 SH3BP2P78314 561 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 APBA1Q02410 837 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 DSG1Q02413 1049 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 HERC6Q8IVU3 1022 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 LSMEM1Q8N8F7 131 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CHST13Q8NET6 341 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 STT3BQ8TCJ2 826 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 APPBP2Q92624 585 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 PDCD2LQ9BRP1 358 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 TTLL2Q9BWV7 592 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 UNC93B1Q9H1C4 597 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 PPM1HQ9ULR3 514 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 LRP6O75581 1613 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 GRIK1P39086 918 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 IFFO2Q5TF58 517 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 OTOP1Q7RTM1 612 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 SCUBE3Q8IX30 993 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 NUP88Q99567 741 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 FOXD3Q9UJU5 478 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 MLH3Q9UHC1 1453 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 SBF2Q86WG5 1849 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 E2F8A0AVK6 867 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 PDPK1O15530 556 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CDC45O75419 566 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CKMP06732 381 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CDC37Q16543 378 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 TJAP1Q5JTD0 557 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 DUSP27Q5VZP5 1158 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 MAP4K3Q8IVH8 894 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM87BQ96K49 555 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 TARS2Q9BW92 718 aaKnown RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 GSX1Q9H4S2 264 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 MARK1Q9P0L2 795 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 GJA3Q9Y6H8 435 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 SCAF11Q99590 1463 aaKnown RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 A0A1B0GUL6 1792 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 KIAA1217Q5T5P2 1943 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms