RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
TOP3B-201ENST00000357179 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
TOP3B-201ENST00000357179 CDKL5O76039 1030 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
TOP3B-201ENST00000357179 WASHC4Q2M389 1173 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 TACO1Q9BSH4 297 aaKnown RBP16.62■□□□□ 0.25
TOP3B-201ENST00000357179 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 ZNF213O14771 459 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 BMP6P22004 513 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 CDC27P30260 824 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 HAND2P61296 217 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 SKIDA1Q1XH10 827 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
TOP3B-201ENST00000357179 SLC35F6Q8N357 371 aa16.62■□□□□ 0.25
TOP3B-201ENST00000357179 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
TOP3B-201ENST00000357179 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
TOP3B-201ENST00000357179 TTLL7Q6ZT98 887 aa16.61■□□□□ 0.25
TOP3B-201ENST00000357179 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-201ENST00000357179 PRPF38AQ8NAV1 312 aaKnown RBP16.61■□□□□ 0.25
TOP3B-201ENST00000357179 NAPGQ99747 312 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-201ENST00000357179 ADAMTSL3P82987 1691 aa16.61■□□□□ 0.25
TOP3B-201ENST00000357179 PTPAQ15257 358 aa16.61■□□□□ 0.25
TOP3B-201ENST00000357179 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
TOP3B-201ENST00000357179 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 IRAK1P51617 712 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 SATB1Q01826 763 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 NR1I3Q14994 352 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 XAGE2Q96GT9 111 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 NFE2L3Q9Y4A8 694 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 PCDHA5Q9Y5H7 936 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 C21orf2O43822 256 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 TRDNQ13061 729 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 INPP5BP32019 993 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 MAP9Q49MG5 647 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
TOP3B-201ENST00000357179 VPS37DQ86XT2 251 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
TOP3B-201ENST00000357179 TDO2P48775 406 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 AMPD2Q01433 879 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 DDR1Q08345 913 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 ENOX1Q8TC92 643 aaKnown RBP16.59■□□□□ 0.25
TOP3B-201ENST00000357179 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 GJB4Q9NTQ9 266 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 GPAA1O43292 621 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 MCM3P25205 808 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
TOP3B-201ENST00000357179 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-201ENST00000357179 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
TOP3B-201ENST00000357179 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
TOP3B-201ENST00000357179 ATRNO75882 1429 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 A0A1B0GTH6 734 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 USP14P54578 494 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.25
TOP3B-201ENST00000357179 STIM1Q13586 685 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 KRT40Q6A162 431 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.25
TOP3B-201ENST00000357179 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.252e-9■■■■□ 23.1
TOP3B-201ENST00000357179 MYO1AQ9UBC5 1043 aa16.58■□□□□ 0.25
TOP3B-201ENST00000357179 MYH7P12883 1935 aa16.58■□□□□ 0.24
TOP3B-201ENST00000357179 GGCXP38435 758 aa16.58■□□□□ 0.24
TOP3B-201ENST00000357179 METAP2P50579 478 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■□□□□ 9
TOP3B-201ENST00000357179 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
TOP3B-201ENST00000357179 ISCA1Q9BUE6 129 aa16.58■□□□□ 0.24
TOP3B-201ENST00000357179 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
TOP3B-201ENST00000357179 SH2B2O14492 632 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-201ENST00000357179 ADORA1P30542 326 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 SETQ01105 290 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-201ENST00000357179 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 CABS1Q96KC9 395 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 AGPSO00116 658 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 GPTP24298 496 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 ZAP70P43403 619 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 GBP6Q6ZN66 633 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 BCAS4Q8TDM0 211 aa16.57■□□□□ 0.24
TOP3B-201ENST00000357179 GNL3LQ9NVN8 582 aaKnown RBP16.57■□□□□ 0.24
TOP3B-201ENST00000357179 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
TOP3B-201ENST00000357179 ZNF512BQ96KM6 892 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-201ENST00000357179 PLA2G12BQ9BX93 195 aa16.56■□□□□ 0.24
TOP3B-201ENST00000357179 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
TOP3B-201ENST00000357179 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
TOP3B-201ENST00000357179 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
TOP3B-201ENST00000357179 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms