RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 LAMB1P07942 1786 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 ZNF213O14771 459 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 GH2P01242 217 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 GJA5P36382 358 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 VEGFBP49765 207 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 NOL9Q5SY16 702 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 CTNNA3Q9UI47 895 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 ANAPC4Q9UJX5 808 aa21.25■□□□□ 0.99
PDLIM7-202ENST00000355841 FAM155AB1AL88 458 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 MPHOSPH10O00566 681 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 AKR1B1P15121 316 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 PTPRAP18433 802 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 RASA1P20936 1047 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 ABCB5Q2M3G0 1257 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 ZIC5Q96T25 663 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 TAF6LQ9Y6J9 622 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 UNCXA6NJT0 531 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 AOC2O75106 756 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 PDE4BQ07343 736 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 IMMTQ16891 758 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
PDLIM7-202ENST00000355841 SLC10A3P09131 477 aa21.23■□□□□ 0.99
PDLIM7-202ENST00000355841 RAB3GAP1Q15042 981 aa21.23■□□□□ 0.99
PDLIM7-202ENST00000355841 TOMM22Q9NS69 142 aa21.23■□□□□ 0.99
PDLIM7-202ENST00000355841 ZHX2Q9Y6X8 837 aa21.23■□□□□ 0.99
PDLIM7-202ENST00000355841 SPDYE5A6NIY4 337 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 CYP21A2P08686 494 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 FAM47AQ5JRC9 791 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 SPRYD7Q5W111 196 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 ERO1BQ86YB8 467 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 CLEC10AQ8IUN9 316 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 NKX2-3Q8TAU0 364 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-202ENST00000355841 ASNSP08243 561 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 SEPT2Q15019 361 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 AKNAD1Q5T1N1 836 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 IRF6O14896 467 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 DNAJC5GQ8N7S2 189 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 ZNF287Q9HBT7 754 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 NEDD4P46934 1319 aa21.21■□□□□ 0.99
PDLIM7-202ENST00000355841 DOCK1Q14185 1865 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 RANBP6O60518 1105 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 ECE1P42892 770 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 PPATQ06203 517 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 MFSD6Q6ZSS7 791 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
PDLIM7-202ENST00000355841 TRIM75PA6NK02 468 aa21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 USP17L5A8MUK1 530 aa21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 REC8O95072 547 aa21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM7-202ENST00000355841 SLC27A2O14975 620 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 SEC24BO95487 1268 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 FGRP09769 529 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 TFAP4Q01664 338 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 PPIL2Q13356 520 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 CREB3L3Q68CJ9 461 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 AFG3L2Q9Y4W6 797 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 ORC4O43929 436 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 ZBTB48P10074 688 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 SPP2Q13103 211 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 TMEM179Q6ZVK1 233 aa21.18■□□□□ 0.98
PDLIM7-202ENST00000355841 MYH8P13535 1937 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 TSPY2A6NKD2 308 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 NMT2O60551 498 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 NOGQ13253 232 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 DGKZQ13574 1117 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 STOX1Q6ZVD7 989 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 ACER1Q8TDN7 264 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 RNF41Q9H4P4 317 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 LAMA4Q16363 1823 aa21.17■□□□□ 0.98
PDLIM7-202ENST00000355841 B4E1Z4 1266 aa21.16■□□□□ 0.98
PDLIM7-202ENST00000355841 ZNF280CQ8ND82 737 aa21.16■□□□□ 0.98
PDLIM7-202ENST00000355841 E7EWF7 191 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 MS4A4AQ96JQ5 239 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 GINM1Q9NU53 330 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 KDM4AO75164 1064 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 ICA1Q05084 483 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 MTMR2Q13614 643 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 ZYXQ15942 572 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms