RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SPDYE3A6NKU9 549 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 TTC38Q5R3I4 469 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 MIER3Q7Z3K6 550 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 ACTR5Q9H9F9 607 aaPredicted RBP14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 PPP2R5BQ15173 497 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 TERF2Q15554 542 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 CUL7Q14999 1698 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 EVI5O60447 810 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 PFDN1O60925 122 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 ANKRD42Q8N9B4 389 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 TESK2Q96S53 571 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 CTTNBP2NLQ9P2B4 639 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 TRMT44Q8IYL2 757 aaKnown RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 SEC31AO94979 1220 aaKnown RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 GAS8O95995 478 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 MAGEA9P43362 315 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 PNOCQ13519 176 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 ICE2Q659A1 982 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 EPSTI1Q96J88 318 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 COG7P83436 770 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 SLC4A8Q2Y0W8 1093 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 TYW1BQ6NUM6 668 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 MGARPQ8TDB4 240 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 KRT40Q6A162 431 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 AMFRQ9UKV5 643 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 FAF1Q9UNN5 650 aaPredicted RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 RGS12O14924 1447 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 CCDC169A6NNP5 214 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 SUN1O94901 812 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 HNRNPH2P55795 449 aaKnown RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 IFT88Q13099 833 aa14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
SYNCRIP-201ENST00000355238 PFKFB1P16118 471 aa14.08□□□□□ -0.15
SYNCRIP-201ENST00000355238 CERS3Q8IU89 383 aa14.08□□□□□ -0.15
SYNCRIP-201ENST00000355238 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.15
SYNCRIP-201ENST00000355238 ME3Q16798 604 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 SNX16P57768 344 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 LETM2Q2VYF4 491 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 MAGEB6Q8N7X4 407 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 JAK2O60674 1132 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 MYSM1Q5VVJ2 828 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 RPSAP08865 295 aaKnown RBP14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 ZKSCAN8Q15776 578 aaPredicted RBP14.08□□□□□ -0.16
SYNCRIP-201ENST00000355238 PIK3AP1Q6ZUJ8 805 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 ERCC3P19447 782 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 DNM2P50570 870 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 PSMD6Q15008 389 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 WDR44Q5JSH3 913 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 CMA1P23946 247 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 CLCN6P51797 869 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 EPHB4P54760 987 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 RRAGAQ7L523 313 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 SPTLC3Q9NUV7 552 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 ACEP12821 1306 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 STMN1P16949 149 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 SF3A3Q12874 501 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■■□ 20.5
SYNCRIP-201ENST00000355238 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 PPP2R5AQ15172 486 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 RILPQ96NA2 401 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 B4E1Z4 1266 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 GNA14O95837 355 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 KRT5P13647 590 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 FAM227BQ96M60 508 aa14.07□□□□□ -0.16
SYNCRIP-201ENST00000355238 KRIT1O00522 736 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 HAUS3Q68CZ6 603 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 CCT6BQ92526 530 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 PPARDQ03181 441 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 PPP1R21Q6ZMI0 780 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 SERTAD1Q9UHV2 236 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 FBXO18Q8NFZ0 1043 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 ANTXR1Q9H6X2 564 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 MYO1CO00159 1063 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 PKP1Q13835 747 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 CWF19L2Q2TBE0 894 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 836.3 ms