RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 HAUS7Q99871 368 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
GABPA-201ENST00000354828 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 SASH1O94885 1247 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 BRAPQ7Z569 592 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 FBXO11Q86XK2 927 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 SWAP70Q9UH65 585 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 SERPINB13Q9UIV8 391 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 GCOM1H8Y6P7 765 aaPredicted RBP10.98□□□□□ -0.65
GABPA-201ENST00000354828 POLR2MP0CAP2 368 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 GOLGA8HP0CJ92 632 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 SV2BQ7L1I2 683 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
GABPA-201ENST00000354828 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
GABPA-201ENST00000354828 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
GABPA-201ENST00000354828 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
GABPA-201ENST00000354828 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
GABPA-201ENST00000354828 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
GABPA-201ENST00000354828 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 RNF169Q8NCN4 708 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 MYO3BQ8WXR4 1341 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 PHKBQ93100 1093 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 SEC62Q99442 399 aaKnown RBP10.97□□□□□ -0.65
GABPA-201ENST00000354828 PI4KBQ9UBF8 816 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 TECPR2O15040 1411 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 USO1O60763 962 aaKnown RBP10.97□□□□□ -0.65
GABPA-201ENST00000354828 BIRC3Q13489 604 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 UBE3CQ15386 1083 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 SLC15A2Q16348 729 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 IQUBQ8NA54 791 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 E7EWF7 191 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 UBE2HP62256 183 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 AP5M1Q9H0R1 490 aa10.97□□□□□ -0.65
GABPA-201ENST00000354828 SMCO2A6NFE2 343 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 DIS3L2Q8IYB7 885 aaKnown RBP10.96□□□□□ -0.65
GABPA-201ENST00000354828 ZNF654Q8IZM8 581 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 FAM43AQ8N2R8 423 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 NOP2P46087 812 aaKnown RBP10.96□□□□□ -0.65
GABPA-201ENST00000354828 CELF1Q92879 486 aaKnown RBP10.96□□□□□ -0.65
GABPA-201ENST00000354828 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
GABPA-201ENST00000354828 KLRF2D3W0D1 207 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 F13A1P00488 732 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 CACNB3P54284 484 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 DBNLQ9UJU6 430 aaKnown RBP10.96□□□□□ -0.66
GABPA-201ENST00000354828 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 GAS7O60861 476 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 PLCD1P51178 756 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 DNM1Q05193 864 aaKnown RBP10.96□□□□□ -0.66
GABPA-201ENST00000354828 HSP90AA4PQ58FG1 418 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 UTP14CQ5TAP6 766 aaKnown RBP10.96□□□□□ -0.66
GABPA-201ENST00000354828 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.66
GABPA-201ENST00000354828 IQCEQ6IPM2 695 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 CCDC117Q8IWD4 279 aaPredicted RBP10.95□□□□□ -0.66
GABPA-201ENST00000354828 HACE1Q8IYU2 909 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 FERMT1Q9BQL6 677 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 PNMA3Q9UL41 463 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 TNKSO95271 1327 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.95□□□□□ -0.66
GABPA-201ENST00000354828 LRWD1Q9UFC0 647 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 TMCO5BA8MYB1 307 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 MINPP1Q9UNW1 487 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 RICTORQ6R327 1708 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 CRKP46108 304 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 MIER3Q7Z3K6 550 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
GABPA-201ENST00000354828 TDRD3Q9H7E2 651 aaKnown RBP10.95□□□□□ -0.66
GABPA-201ENST00000354828 ZHX1Q9UKY1 873 aaPredicted RBP10.95□□□□□ -0.66
GABPA-201ENST00000354828 RPL13P26373 211 aaKnown RBP10.94□□□□□ -0.66
GABPA-201ENST00000354828 ZNF165P49910 485 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 CALCRLQ16602 461 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 TTC38Q5R3I4 469 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 RC3H1Q5TC82 1133 aaKnown RBP10.94□□□□□ -0.66
GABPA-201ENST00000354828 PI16Q6UXB8 463 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 A0A0D9SFI3 127 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 H7C1W4 665 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 FGAP02671 866 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 HSPD1P10809 573 aaKnown RBP10.94□□□□□ -0.66
GABPA-201ENST00000354828 VPS54Q9P1Q0 977 aa10.94□□□□□ -0.66
GABPA-201ENST00000354828 VWDEQ8N2E2 1590 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms