RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CNNM4Q6P4Q7 775 aa2.24□□□□□ -2.05
BRCA1-202ENST00000354071 C12orf40Q86WS4 652 aa2.24□□□□□ -2.05
BRCA1-202ENST00000354071 PMEPA1Q969W9 287 aa2.24□□□□□ -2.05
BRCA1-202ENST00000354071 CARD10Q9BWT7 1032 aa2.24□□□□□ -2.05
BRCA1-202ENST00000354071 AVENQ9NQS1 362 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-202ENST00000354071 DNAJB12Q9NXW2 375 aaKnown RBP2.24□□□□□ -2.05
BRCA1-202ENST00000354071 ATXN7L1Q9ULK2 861 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-202ENST00000354071 NOB1Q9ULX3 412 aaKnown RBP2.24□□□□□ -2.05
BRCA1-202ENST00000354071 PRKAB1Q9Y478 270 aa2.24□□□□□ -2.05
BRCA1-202ENST00000354071 GFRA2O00451 464 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SOX1O00570 391 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 UPP2O95045 317 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 MAP3K6O95382 1288 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 BPNT1O95861 308 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 EPXP11678 715 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 LMNB1P20700 586 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 GUCY2CP25092 1073 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SOX18P35713 384 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RPS26P62854 115 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NFKB2Q00653 900 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 TCEA2Q15560 299 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SEPT7Q16181 437 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 FGD2Q7Z6J4 655 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ATG4CQ96DT6 458 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 TRIM11Q96F44 468 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ASPSCR1Q9BZE9 553 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 EHMT1Q9H9B1 1298 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 OSGEPQ9NPF4 335 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 MBIPQ9NS73 344 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PCDHA4Q9UN74 947 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NACADO15069 1562 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 GSG1L2A8MUP6 293 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SUSD5O60279 629 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 WFS1O76024 890 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PROCP04070 461 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ESRRAP11474 423 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RHBDL3P58872 404 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 MCL1Q07820 350 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PCBP1Q15365 356 aaKnown RBP eCLIP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ARSHQ5FYA8 562 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SYCP2LQ5T4T6 812 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 FAM35AQ86V20 835 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 VWA5B2Q8N398 1253 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 LPIN3Q9BQK8 851 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SMG9Q9H0W8 520 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 MARK1Q9P0L2 795 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SOX13Q9UN79 622 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PCDHGC4Q9Y5F7 938 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ADAMTS7Q9UKP4 1686 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 WASHC2CQ9Y4E1 1318 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 CELA2BP08218 269 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NME2P22392 152 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 CCNFP41002 786 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RPL6Q02878 288 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 EFHC2Q5JST6 749 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 C8orf86Q6ZUL3 223 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 LRP10Q7Z4F1 713 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SYT9Q86SS6 491 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 REXO1Q8N1G1 1221 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ZSCAN1Q8NBB4 408 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NUDT8Q8WV74 236 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 BSNDQ8WZ55 320 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 FGD4Q96M96 766 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SSBP4Q9BWG4 385 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SPATA9Q9BWV2 254 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NUCKS1Q9H1E3 243 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 CCDC86Q9H6F5 360 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NCOA5Q9HCD5 579 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ZIM2Q9NZV7 527 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 A0A1W2PQU0 124 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SLC22A31A6NKX4 558 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 DDX3YO15523 660 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 ARAFP10398 606 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RLBP1P12271 317 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 FGFR3P22607 806 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PRELPP51888 382 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 KCNMA1Q12791 1236 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 HSP90AB2PQ58FF8 381 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 DCAF15Q66K64 600 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SLC51AQ86UW1 340 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 TMEM192Q8IY95 271 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 AFAP1L2Q8N4X5 818 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RBBP8NLQ8NC74 664 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 LEO1Q8WVC0 666 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 TMEM40Q8WWA1 233 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 NINJ1Q92982 152 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 PSMD1Q99460 953 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 SPOCK3Q9BQ16 436 aa2.23□□□□□ -2.05
BRCA1-202ENST00000354071 RTFDC1Q9BY42 306 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 UBE2OQ9C0C9 1292 aaKnown RBP2.23□□□□□ -2.05
BRCA1-202ENST00000354071 IGF1RP08069 1367 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 USP34Q70CQ2 3546 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ZNF862O60290 1169 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 EPHX1P07099 455 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 LIG1P18858 919 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ARNTP27540 789 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GNALP38405 381 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GUCY2FP51841 1108 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GPLD1P80108 840 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 EXOSC10Q01780 885 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms