RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 DDRGK1Q96HY6 314 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.52■■□□□ 1.04
CKLF-202ENST00000345436 MTMR2Q13614 643 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 CERKLQ49MI3 558 aaPredicted RBP21.51■■□□□ 1.03
CKLF-202ENST00000345436 TREML2Q5T2D2 321 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 AMOTL1Q8IY63 956 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 BOLA2Q9H3K6 86 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 ZNF532Q9HCE3 1301 aa21.51■■□□□ 1.03
CKLF-202ENST00000345436 GDF11O95390 407 aa21.5■■□□□ 1.03
CKLF-202ENST00000345436 CAPN2P17655 700 aa21.5■■□□□ 1.03
CKLF-202ENST00000345436 EN2P19622 333 aaPredicted RBP21.5■■□□□ 1.03
CKLF-202ENST00000345436 RRP1BQ14684 758 aaKnown RBP21.5■■□□□ 1.03
CKLF-202ENST00000345436 TATDN1Q6P1N9 297 aa21.5■■□□□ 1.03
CKLF-202ENST00000345436 USP17L2Q6R6M4 530 aa21.5■■□□□ 1.03
CKLF-202ENST00000345436 GTF3C2Q8WUA4 911 aaPredicted RBP21.5■■□□□ 1.03
CKLF-202ENST00000345436 RIOK1Q9BRS2 568 aaKnown RBP21.5■■□□□ 1.03
CKLF-202ENST00000345436 ASCC2Q9H1I8 757 aaPredicted RBP21.5■■□□□ 1.03
CKLF-202ENST00000345436 MYCP01106 439 aaPredicted RBP21.49■■□□□ 1.03
CKLF-202ENST00000345436 HOXA7P31268 230 aaPredicted RBP21.49■■□□□ 1.03
CKLF-202ENST00000345436 USP14P54578 494 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 PRKCZQ05513 592 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 C20orf194Q5TEA3 1177 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 FEZ1Q99689 392 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 HAUS7Q99871 368 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
CKLF-202ENST00000345436 GH2P01242 217 aa21.48■■□□□ 1.03
CKLF-202ENST00000345436 CTGFP29279 349 aa21.48■■□□□ 1.03
CKLF-202ENST00000345436 ABCB5Q2M3G0 1257 aa21.48■■□□□ 1.03
CKLF-202ENST00000345436 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
CKLF-202ENST00000345436 PXYLP1Q8TE99 480 aa21.48■■□□□ 1.03
CKLF-202ENST00000345436 FLT3LGP49771 235 aa21.47■■□□□ 1.03
CKLF-202ENST00000345436 IRF5Q13568 498 aa21.47■■□□□ 1.03
CKLF-202ENST00000345436 ATP8A2Q9NTI2 1148 aa21.47■■□□□ 1.03
CKLF-202ENST00000345436 ADCY3O60266 1144 aa21.46■■□□□ 1.03
CKLF-202ENST00000345436 RAB3GAP1Q15042 981 aa21.46■■□□□ 1.03
CKLF-202ENST00000345436 ECHDC1Q9NTX5 307 aa21.46■■□□□ 1.03
CKLF-202ENST00000345436 TNRC18O15417 2968 aaPredicted RBP21.45■■□□□ 1.03
CKLF-202ENST00000345436 PDE4DIPQ5VU43 2346 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 ADD2P35612 726 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 UBE3CQ15386 1083 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 LRRFIP1Q32MZ4 808 aaKnown RBP21.45■■□□□ 1.02
CKLF-202ENST00000345436 GPRC5AQ8NFJ5 357 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 RNF208Q9H0X6 261 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 DCTPP1Q9H773 170 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
CKLF-202ENST00000345436 SWAP70Q9UH65 585 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 HTTP42858 3142 aa21.45■■□□□ 1.02
CKLF-202ENST00000345436 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
CKLF-202ENST00000345436 GJB1P08034 283 aa21.44■■□□□ 1.02
CKLF-202ENST00000345436 MORF4L1Q9UBU8 362 aa21.44■■□□□ 1.02
CKLF-202ENST00000345436 GABRQQ9UN88 632 aa21.44■■□□□ 1.02
CKLF-202ENST00000345436 KIAA0100Q14667 2235 aaKnown RBP21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L15C9J2P7 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L13C9JLJ4 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L11C9JVI0 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L18D6R9N7 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L22D6RA61 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L17D6RBQ6 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L19D6RCP7 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L20D6RJB6 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 CCL5P13501 91 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 PLCD1P51178 756 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 HERVK_113P62684 666 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 JAG1P78504 1218 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 USP17L24Q0WX57 530 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
CKLF-202ENST00000345436 KIAA1683Q9H0B3 1180 aa21.43■■□□□ 1.02
CKLF-202ENST00000345436 DCP1AQ9NPI6 582 aaPredicted RBP21.43■■□□□ 1.02
CKLF-202ENST00000345436 MPHOSPH10O00566 681 aaKnown RBP21.42■■□□□ 1.02
CKLF-202ENST00000345436 LCORLQ8N3X6 602 aa21.42■■□□□ 1.02
CKLF-202ENST00000345436 PHIPQ8WWQ0 1821 aa21.42■■□□□ 1.02
CKLF-202ENST00000345436 EDC3Q96F86 508 aaKnown RBP21.42■■□□□ 1.02
CKLF-202ENST00000345436 C12orf42Q96LP6 360 aa21.42■■□□□ 1.02
CKLF-202ENST00000345436 ARMT1Q9H993 441 aa21.42■■□□□ 1.02
CKLF-202ENST00000345436 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
CKLF-202ENST00000345436 SMARCA5O60264 1052 aaPredicted RBP21.41■■□□□ 1.02
CKLF-202ENST00000345436 MBD4O95243 580 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 MAPK4P31152 587 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 SHMT1P34896 483 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 GJA8P48165 433 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 CCNA1P78396 465 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 MTFR1Q15390 333 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 SDR42E1Q8WUS8 393 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 EMILIN3Q9NT22 766 aa21.41■■□□□ 1.02
CKLF-202ENST00000345436 GLRX3O76003 335 aaKnown RBP21.4■■□□□ 1.02
CKLF-202ENST00000345436 GABPAQ06546 454 aa21.4■■□□□ 1.02
CKLF-202ENST00000345436 CCDC17Q96LX7 622 aa21.4■■□□□ 1.02
CKLF-202ENST00000345436 SH2D4AQ9H788 454 aa21.4■■□□□ 1.02
CKLF-202ENST00000345436 MYO5AQ9Y4I1 1855 aaKnown RBP21.4■■□□□ 1.02
CKLF-202ENST00000345436 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
CKLF-202ENST00000345436 PTPRFP10586 1907 aa21.39■■□□□ 1.02
CKLF-202ENST00000345436 ERC2O15083 957 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 INHAP05111 366 aa21.39■■□□□ 1.01
CKLF-202ENST00000345436 ZFYP08048 801 aaPredicted RBP21.39■■□□□ 1.01
CKLF-202ENST00000345436 ZYXQ15942 572 aaKnown RBP21.39■■□□□ 1.01
CKLF-202ENST00000345436 TMEM179Q6ZVK1 233 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms