RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 STAP2Q9UGK3 403 aa18.42■□□□□ 0.54
PRKN-201ENST00000338468 KIAA0100Q14667 2235 aaKnown RBP18.41■□□□□ 0.54
PRKN-201ENST00000338468 TRIM75PA6NK02 468 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 ERC2O15083 957 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 GABPAQ06546 454 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 TATDN1Q6P1N9 297 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 OSBP2Q969R2 916 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 ZFYVE28Q9HCC9 887 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
PRKN-201ENST00000338468 PDHXO00330 501 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
PRKN-201ENST00000338468 GDF11O95390 407 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 CYP2D6P10635 497 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 PDE1AP54750 535 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 SP3Q02447 781 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 MCM9Q9NXL9 1143 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 ADGRA2Q96PE1 1338 aa18.4■□□□□ 0.54
PRKN-201ENST00000338468 USP17L5A8MUK1 530 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 SHMT1P34896 483 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 SPP2Q13103 211 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 ZNF280CQ8ND82 737 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 STRBPQ96SI9 672 aaKnown RBP18.39■□□□□ 0.53
PRKN-201ENST00000338468 TRIM34Q9BYJ4 488 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 ATP8A2Q9NTI2 1148 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 ZBTB21Q9ULJ3 1066 aa18.39■□□□□ 0.53
PRKN-201ENST00000338468 TLR2O60603 784 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 POLR3DP05423 398 aaPredicted RBP18.38■□□□□ 0.53
PRKN-201ENST00000338468 ASNSP08243 561 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
PRKN-201ENST00000338468 NUCB1Q02818 461 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
PRKN-201ENST00000338468 APPBP2Q92624 585 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
PRKN-201ENST00000338468 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
PRKN-201ENST00000338468 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
PRKN-201ENST00000338468 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 M0R2C6 588 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 ZFYP08048 801 aaPredicted RBP18.37■□□□□ 0.53
PRKN-201ENST00000338468 ARHGEF6Q15052 776 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 GINM1Q9NU53 330 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 SLC4A4Q9Y6R1 1079 aa18.37■□□□□ 0.53
PRKN-201ENST00000338468 GH2P01242 217 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 CYP2C8P10632 490 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 SH3D19Q5HYK7 790 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 C17orf99Q6UX52 265 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 ZNF333Q96JL9 665 aa18.36■□□□□ 0.53
PRKN-201ENST00000338468 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
PRKN-201ENST00000338468 GSG1L2A8MUP6 293 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 USP17L12C9JPN9 530 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 USP17L21D6R901 530 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 GPAA1O43292 621 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 FXR1P51114 621 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRKN-201ENST00000338468 HMGCS2P54868 508 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 CERKLQ49MI3 558 aaPredicted RBP18.35■□□□□ 0.53
PRKN-201ENST00000338468 SLC9C1Q4G0N8 1177 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 NBPF11Q86T75 865 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
PRKN-201ENST00000338468 DYNLL2Q96FJ2 89 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 FSD1Q9BTV5 496 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 CPA4Q9UI42 421 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 SLC45A1Q9Y2W3 748 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 ZSWIM8A7E2V4 1837 aa18.35■□□□□ 0.53
PRKN-201ENST00000338468 BACE1P56817 501 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 MTMR2Q13614 643 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 ZMYM1Q5SVZ6 1142 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 CTR9Q6PD62 1173 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 AS3MTQ9HBK9 375 aa18.34■□□□□ 0.53
PRKN-201ENST00000338468 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
PRKN-201ENST00000338468 ABCB5Q2M3G0 1257 aa18.33■□□□□ 0.52
PRKN-201ENST00000338468 PARK7Q99497 189 aaKnown RBP18.33■□□□□ 0.52
PRKN-201ENST00000338468 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
PRKN-201ENST00000338468 BCRP11274 1271 aa18.32■□□□□ 0.52
PRKN-201ENST00000338468 CTGFP29279 349 aa18.32■□□□□ 0.52
PRKN-201ENST00000338468 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
PRKN-201ENST00000338468 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
PRKN-201ENST00000338468 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
PRKN-201ENST00000338468 OSBPL3Q9H4L5 887 aa18.32■□□□□ 0.52
PRKN-201ENST00000338468 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
PRKN-201ENST00000338468 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 GIMAP6Q6P9H5 292 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 C16orf86Q6ZW13 317 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 ACER1Q8TDN7 264 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 SWAP70Q9UH65 585 aa18.31■□□□□ 0.52
PRKN-201ENST00000338468 TAOK2Q9UL54 1235 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms