RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 RCAN3Q9UKA8 241 aa20.78■□□□□ 0.92
VSTM1-201ENST00000338372 GJD2Q9UKL4 321 aa20.78■□□□□ 0.92
VSTM1-201ENST00000338372 ZBTB21Q9ULJ3 1066 aa20.78■□□□□ 0.92
VSTM1-201ENST00000338372 CEP290O15078 2479 aa20.78■□□□□ 0.92
VSTM1-201ENST00000338372 GJB1P08034 283 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 CCL5P13501 91 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 GJA8P48165 433 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 EVX2Q03828 476 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 MTMR2Q13614 643 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 PXYLP1Q8TE99 480 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 SMCR8Q8TEV9 937 aaPredicted RBP20.77■□□□□ 0.92
VSTM1-201ENST00000338372 EHD4Q9H223 541 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 MORF4L1Q9UBU8 362 aa20.77■□□□□ 0.92
VSTM1-201ENST00000338372 MYH7P12883 1935 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 PDE6AP16499 860 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 GCLCP48506 637 aaPredicted RBP20.76■□□□□ 0.91
VSTM1-201ENST00000338372 PLCD1P51178 756 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 GABPAQ06546 454 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 MAP3K12Q12852 859 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 CERS3Q8IU89 383 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 SLAIN1Q8ND83 568 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 EDC3Q96F86 508 aaKnown RBP20.76■□□□□ 0.91
VSTM1-201ENST00000338372 P2RX7Q99572 595 aaKnown RBP20.76■□□□□ 0.91
VSTM1-201ENST00000338372 EMILIN3Q9NT22 766 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
VSTM1-201ENST00000338372 C19orf81C9J6K1 198 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 ADCY3O60266 1144 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 PEX10O60683 326 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 ELNP15502 786 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 CLASRPQ8N2M8 674 aaKnown RBP20.75■□□□□ 0.91
VSTM1-201ENST00000338372 UNC93B1Q9H1C4 597 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 TXNRD2Q9NNW7 524 aa20.75■□□□□ 0.91
VSTM1-201ENST00000338372 USP17L10C9JJH3 530 aa20.74■□□□□ 0.91
VSTM1-201ENST00000338372 TNPO2O14787 897 aaKnown RBP20.74■□□□□ 0.91
VSTM1-201ENST00000338372 RAB11FIP3O75154 756 aa20.74■□□□□ 0.91
VSTM1-201ENST00000338372 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
VSTM1-201ENST00000338372 SHMT1P34896 483 aa20.74■□□□□ 0.91
VSTM1-201ENST00000338372 CRACR2BQ8N4Y2 399 aaPredicted RBP20.74■□□□□ 0.91
VSTM1-201ENST00000338372 SERPINB13Q9UIV8 391 aa20.74■□□□□ 0.91
VSTM1-201ENST00000338372 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
VSTM1-201ENST00000338372 RLFQ13129 1914 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 APBB1O00213 710 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 GH2P01242 217 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 HLA-DOAP06340 250 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.91
VSTM1-201ENST00000338372 PDE3AQ14432 1141 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 TTF1Q15361 905 aaPredicted RBP20.73■□□□□ 0.91
VSTM1-201ENST00000338372 Q3C1V9 767 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 SLFNL1Q499Z3 407 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 SLC9C2Q5TAH2 1124 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 C12orf42Q96LP6 360 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 RNF208Q9H0X6 261 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 RBPJLQ9UBG7 517 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 ZNF532Q9HCE3 1301 aa20.73■□□□□ 0.91
VSTM1-201ENST00000338372 HMMRO75330 724 aa20.72■□□□□ 0.91
VSTM1-201ENST00000338372 CHGBP05060 677 aa20.72■□□□□ 0.91
VSTM1-201ENST00000338372 ATP5JP18859 108 aa20.72■□□□□ 0.91
VSTM1-201ENST00000338372 USP5P45974 858 aa20.72■□□□□ 0.91
VSTM1-201ENST00000338372 PAK6Q9NQU5 681 aaPredicted RBP20.72■□□□□ 0.91
VSTM1-201ENST00000338372 ALPK3Q96L96 1907 aa20.72■□□□□ 0.91
VSTM1-201ENST00000338372 MAGEB6P1A0A0J9YX57 407 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 GOLIM4O00461 696 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 SGPL1O95470 568 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 INHAP05111 366 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 HERVK_113P62684 666 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 UBXN2AP68543 259 aa20.71■□□□□ 0.91
VSTM1-201ENST00000338372 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
VSTM1-201ENST00000338372 TTC6Q86TZ1 520 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 LCORLQ8N3X6 602 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 NKX2-3Q8TAU0 364 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 ACER1Q8TDN7 264 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 COA7Q96BR5 231 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 CRISPLD2Q9H0B8 497 aa20.7■□□□□ 0.9
VSTM1-201ENST00000338372 DCP1AQ9NPI6 582 aaPredicted RBP20.7■□□□□ 0.9
VSTM1-201ENST00000338372 MYH8P13535 1937 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 CNMDO75829 334 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
VSTM1-201ENST00000338372 HABP4Q5JVS0 413 aaKnown RBP20.69■□□□□ 0.9
VSTM1-201ENST00000338372 USP17L2Q6R6M4 530 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 USP6NLQ92738 828 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 DNAJC2Q99543 621 aaKnown RBP20.69■□□□□ 0.9
VSTM1-201ENST00000338372 HAUS7Q99871 368 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
VSTM1-201ENST00000338372 SMIM22K7EJ46 135 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 ADD2P35612 726 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 TRIM32Q13049 653 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
VSTM1-201ENST00000338372 SDR42E1Q8WUS8 393 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 KIAA1683Q9H0B3 1180 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 PAG1Q9NWQ8 432 aa20.68■□□□□ 0.9
VSTM1-201ENST00000338372 BIN2Q9UBW5 565 aaPredicted RBP20.68■□□□□ 0.9
VSTM1-201ENST00000338372 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
VSTM1-201ENST00000338372 GCC1Q96CN9 775 aa20.67■□□□□ 0.9
VSTM1-201ENST00000338372 TRIM34Q9BYJ4 488 aa20.67■□□□□ 0.9
VSTM1-201ENST00000338372 PORCNQ9H237 461 aa20.67■□□□□ 0.9
VSTM1-201ENST00000338372 PARP14Q460N5 1801 aa20.67■□□□□ 0.9
VSTM1-201ENST00000338372 A0A1W2PRG0 241 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 H0YGN5 161 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms