RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 MBD4O95243 580 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 MPNDQ8N594 471 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 CCDC169A6NNP5 214 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 PDZD4Q76G19 769 aaPredicted RBP13.64□□□□□ -0.23
FN1-202ENST00000336916 SND1Q7KZF4 910 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■□□ 17.5
FN1-202ENST00000336916 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 SAMD15Q9P1V8 674 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 TTF2Q9UNY4 1162 aaKnown RBP13.64□□□□□ -0.23
FN1-202ENST00000336916 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
FN1-202ENST00000336916 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 FYB2Q5VWT5 728 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 RIMBP2O15034 1052 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 RBM10P98175 930 aaKnown RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 RAB3IPQ96QF0 476 aaPredicted RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 MAP3K19Q56UN5 1328 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 GEN1Q17RS7 908 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 CCNA1P78396 465 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 CHD4Q14839 1912 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 XPOTO43592 962 aaKnown RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 SPOPO43791 374 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 KDM6BO15054 1643 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 VAMP4O75379 141 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 NOC4LQ9BVI4 516 aaKnown RBP13.63□□□□□ -0.23
FN1-202ENST00000336916 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 TCHHQ07283 1943 aa13.63□□□□□ -0.23
FN1-202ENST00000336916 TYW5A2RUC4 315 aaKnown RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 TRIM37O94972 964 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 MRPL11Q9Y3B7 192 aaKnown RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.62□□□□□ -0.238e-28■■■□□ 14.7
FN1-202ENST00000336916 IQSEC3Q9UPP2 1182 aaPredicted RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 ARID5AQ03989 594 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 PLCB4Q15147 1175 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 ARHGAP24Q8N264 748 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 KBTBD3Q8NAB2 608 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 F8W8V4 182 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 GBP1P32455 592 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 EYA1Q99502 592 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 SEMA3EO15041 775 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 GPAA1O43292 621 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 CTSWP56202 376 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 IFT20Q8IY31 132 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.231e-323■□□□□ 9.4
FN1-202ENST00000336916 TNFAIP3P21580 790 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 GCKRQ14397 625 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 PFDN4Q9NQP4 134 aa13.62□□□□□ -0.23
FN1-202ENST00000336916 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
FN1-202ENST00000336916 PRPF6O94906 941 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 ASIC2Q16515 512 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 EIF3CLB5ME19 914 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 HDXQ7Z353 690 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 EIF3CQ99613 913 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 CNPY2Q9Y2B0 182 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 ZEB2O60315 1214 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 UTP14CQ5TAP6 766 aaKnown RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 C20orf194Q5TEA3 1177 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 PTGS1P23219 599 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 VCXQ9H320 206 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 CHMLP26374 656 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms