RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ANKRD36CQ5JPF3 1778 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 IFIT1BQ5T764 474 aaKnown RBP19.95■□□□□ 0.78
COL9A1-201ENST00000320755 EPSTI1Q96J88 318 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 FAM237AA0A1B0GTK4 181 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 MDM2Q00987 491 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-201ENST00000320755 CAVIN4Q5BKX8 364 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 NOM1Q5C9Z4 860 aaKnown RBP19.94■□□□□ 0.78
COL9A1-201ENST00000320755 SHISA4Q96DD7 197 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 TMX1Q9H3N1 280 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 DDX60Q8IY21 1712 aaKnown RBP19.94■□□□□ 0.78
COL9A1-201ENST00000320755 NMT2O60551 498 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 KLRK1P26718 216 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 ZSCAN10Q96SZ4 725 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-201ENST00000320755 DNAI1Q9UI46 699 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 STRCQ7RTU9 1775 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 USP17L12C9JPN9 530 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 USP17L21D6R901 530 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
COL9A1-201ENST00000320755 STAMQ92783 540 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 CELF1Q92879 486 aaKnown RBP19.93■□□□□ 0.78
COL9A1-201ENST00000320755 SLU7O95391 586 aaKnown RBP19.93■□□□□ 0.78
COL9A1-201ENST00000320755 SEC23AQ15436 765 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 ZNF174Q15697 407 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 FAM47AQ5JRC9 791 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 CATIPQ7Z7H3 387 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 VSTM4Q8IW00 320 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 LRRN4CLQ8ND94 238 aa19.93■□□□□ 0.78
COL9A1-201ENST00000320755 STX17P56962 302 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 SAMSN1Q9NSI8 373 aaKnown RBP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 INTS13Q9NVM9 706 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 ZNF652Q9Y2D9 606 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 TRIM75PA6NK02 468 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 WNT7AO00755 349 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 ADKP55263 362 aaKnown RBP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 RGS22Q8NE09 1264 aa19.92■□□□□ 0.78
COL9A1-201ENST00000320755 RIOK1Q9BRS2 568 aaKnown RBP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 AATFQ9NY61 560 aaKnown RBP eCLIP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 CGNQ9P2M7 1197 aaKnown RBP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 SRPRBQ9Y5M8 271 aaKnown RBP19.92■□□□□ 0.78
COL9A1-201ENST00000320755 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 XBP1P17861 261 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 IQCA1Q86XH1 822 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 SMAP1Q8IYB5 467 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-201ENST00000320755 FAM84BQ96KN1 310 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-201ENST00000320755 MINPP1Q9UNW1 487 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 CHD4Q14839 1912 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-201ENST00000320755 KIF2AO00139 706 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-201ENST00000320755 COBLO75128 1261 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 PKN1Q16512 942 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 ERCC6LQ2NKX8 1250 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 CEP131Q9UPN4 1083 aa19.91■□□□□ 0.78
COL9A1-201ENST00000320755 SMYD4Q8IYR2 804 aaPredicted RBP19.9■□□□□ 0.78
COL9A1-201ENST00000320755 MTMR7Q9Y216 660 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 TAF1P21675 1872 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 COL4A1P02462 1669 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 A0A087X0B3 334 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 KRT2P35908 639 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 SYCP1Q15431 976 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 KMT5BQ4FZB7 885 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 ERO1AQ96HE7 468 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 RNF26Q9BY78 433 aaPredicted RBP19.9■□□□□ 0.78
COL9A1-201ENST00000320755 SPATA31A1Q5TZJ5 1347 aa19.9■□□□□ 0.78
COL9A1-201ENST00000320755 ECM29Q5VYK3 1845 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 MYH2Q9UKX2 1941 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 MYH14Q7Z406 1995 aaKnown RBP19.89■□□□□ 0.77
COL9A1-201ENST00000320755 ACTN4O43707 911 aaKnown RBP19.89■□□□□ 0.77
COL9A1-201ENST00000320755 CTR9Q6PD62 1173 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 CYP2D6P10635 497 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 CREBRFQ8IUR6 639 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 MED15Q96RN5 788 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
COL9A1-201ENST00000320755 VWA3AA6NCI4 1184 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 UBE4AQ14139 1066 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 MLKLQ8NB16 471 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 CPLX3Q8WVH0 158 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 SYMPKQ92797 1274 aaKnown RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 URI1O94763 535 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 ZSCAN20P17040 1043 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 ETF1P62495 437 aaKnown RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 MORC3Q14149 939 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 FBXO38Q6PIJ6 1188 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 KCND1Q9NSA2 647 aa19.88■□□□□ 0.77
COL9A1-201ENST00000320755 BSDC1Q9NW68 430 aaPredicted RBP19.88■□□□□ 0.77
COL9A1-201ENST00000320755 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 ZHX1Q9UKY1 873 aaPredicted RBP19.87■□□□□ 0.77
COL9A1-201ENST00000320755 COL1A1P02452 1464 aaPredicted RBP19.87■□□□□ 0.77
COL9A1-201ENST00000320755 ZNF804BA4D1E1 1349 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 BAZ2AQ9UIF9 1905 aaKnown RBP19.87■□□□□ 0.77
COL9A1-201ENST00000320755 PRDX5P30044 214 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 MECOMQ03112 1051 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 TROAPQ12815 778 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 TBC1D9BQ66K14 1250 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 LINC00116Q8NCU8 138 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 BAG1Q99933 345 aaPredicted RBP19.87■□□□□ 0.77
COL9A1-201ENST00000320755 ANAPC4Q9UJX5 808 aa19.87■□□□□ 0.77
COL9A1-201ENST00000320755 NHSL1Q5SYE7 1610 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 SARSP49591 514 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms