RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 CAP1Q01518 475 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 MTMR2Q13614 643 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 FAM110CQ1W6H9 321 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 CERKLQ49MI3 558 aaPredicted RBP15.34■□□□□ 0.05
CKS2-201ENST00000314355 TREML2Q5T2D2 321 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
CKS2-201ENST00000314355 EHD4Q9H223 541 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
CKS2-201ENST00000314355 ADGRA2Q96PE1 1338 aa15.34■□□□□ 0.05
CKS2-201ENST00000314355 PDE6AP16499 860 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 CAPN2P17655 700 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 PRKCZQ05513 592 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 ABCB5Q2M3G0 1257 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 SIRT2Q8IXJ6 389 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
CKS2-201ENST00000314355 GCC1Q96CN9 775 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 FEZ1Q99689 392 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 RNF208Q9H0X6 261 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
CKS2-201ENST00000314355 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
CKS2-201ENST00000314355 MCM9Q9NXL9 1143 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 ZNF532Q9HCE3 1301 aa15.33■□□□□ 0.04
CKS2-201ENST00000314355 DOCK1Q14185 1865 aa15.32■□□□□ 0.04
CKS2-201ENST00000314355 ADCY3O60266 1144 aa15.32■□□□□ 0.04
CKS2-201ENST00000314355 GH2P01242 217 aa15.32■□□□□ 0.04
CKS2-201ENST00000314355 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
CKS2-201ENST00000314355 FLT3LGP49771 235 aa15.32■□□□□ 0.04
CKS2-201ENST00000314355 PXYLP1Q8TE99 480 aa15.32■□□□□ 0.04
CKS2-201ENST00000314355 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
CKS2-201ENST00000314355 CTGFP29279 349 aa15.31■□□□□ 0.04
CKS2-201ENST00000314355 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
CKS2-201ENST00000314355 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
CKS2-201ENST00000314355 TATDN1Q6P1N9 297 aa15.31■□□□□ 0.04
CKS2-201ENST00000314355 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
CKS2-201ENST00000314355 IRF5Q13568 498 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 C20orf194Q5TEA3 1177 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 HAUS7Q99871 368 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 ATP8A2Q9NTI2 1148 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
CKS2-201ENST00000314355 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 GJB1P08034 283 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 CCL5P13501 91 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 CCNA1P78396 465 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
CKS2-201ENST00000314355 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 GABRQQ9UN88 632 aa15.29■□□□□ 0.04
CKS2-201ENST00000314355 KIAA0100Q14667 2235 aaKnown RBP15.28■□□□□ 0.04
CKS2-201ENST00000314355 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
CKS2-201ENST00000314355 ADD2P35612 726 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 PLCD1P51178 756 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 HERVK_113P62684 666 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 MTFR1Q15390 333 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 ZYXQ15942 572 aaKnown RBP15.28■□□□□ 0.04
CKS2-201ENST00000314355 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 DCTPP1Q9H773 170 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
CKS2-201ENST00000314355 PDE4DIPQ5VU43 2346 aa15.28■□□□□ 0.04
CKS2-201ENST00000314355 SMARCA5O60264 1052 aaPredicted RBP15.27■□□□□ 0.04
CKS2-201ENST00000314355 MBD4O95243 580 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 TFRCP02786 760 aaKnown RBP15.27■□□□□ 0.04
CKS2-201ENST00000314355 MAPK4P31152 587 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 GJA8P48165 433 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 DPF3Q92784 378 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
CKS2-201ENST00000314355 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 MORF4L1Q9UBU8 362 aa15.27■□□□□ 0.04
CKS2-201ENST00000314355 ERC2O15083 957 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 TRMT44Q8IYL2 757 aaKnown RBP15.26■□□□□ 0.03
CKS2-201ENST00000314355 LCORLQ8N3X6 602 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 CCDC17Q96LX7 622 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 PAGR1Q9BTK6 254 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
CKS2-201ENST00000314355 TCRBV5S4A2TA0A5A2 114 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 SGPL1O95470 568 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 INHAP05111 366 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 ELNP15502 786 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 JAG1P78504 1218 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
CKS2-201ENST00000314355 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms