RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 TCRBV5S4A2TA0A5A2 114 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 ADCY3O60266 1144 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
MSL3-201ENST00000312196 BACE1P56817 501 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 U2AF1L4Q8WU68 220 aaKnown RBP10.23□□□□□ -0.77
MSL3-201ENST00000312196 HAUS7Q99871 368 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
MSL3-201ENST00000312196 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
MSL3-201ENST00000312196 USP14P54578 494 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 UBE3CQ15386 1083 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 ADGRA1Q86SQ6 560 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 AATFQ9NY61 560 aaKnown RBP eCLIP10.23□□□□□ -0.77
MSL3-201ENST00000312196 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
MSL3-201ENST00000312196 SWAP70Q9UH65 585 aa10.23□□□□□ -0.77
MSL3-201ENST00000312196 MYH7P12883 1935 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 IFIT2P09913 472 aaKnown RBP10.22□□□□□ -0.77
MSL3-201ENST00000312196 GABPAQ06546 454 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 RRP1BQ14684 758 aaKnown RBP10.22□□□□□ -0.77
MSL3-201ENST00000312196 GADL1Q6ZQY3 521 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 CRNKL1Q9BZJ0 848 aaKnown RBP10.22□□□□□ -0.77
MSL3-201ENST00000312196 KIAA1683Q9H0B3 1180 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 SNRKQ9NRH2 765 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 ATP8A2Q9NTI2 1148 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 TMOD4Q9NZQ9 345 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 ZBTB21Q9ULJ3 1066 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 ZNF236Q9UL36 1845 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 PRKCZQ05513 592 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 MTFR1Q15390 333 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 TRIM34Q9BYJ4 488 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.22□□□□□ -0.774e-7■■■■□ 21.7
MSL3-201ENST00000312196 RNF208Q9H0X6 261 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 DCTPP1Q9H773 170 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
MSL3-201ENST00000312196 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 HMGCRP04035 888 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 PDE6AP16499 860 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 SOCS4Q8WXH5 440 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 SERPINB13Q9UIV8 391 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 ZSWIM8A7E2V4 1837 aa10.21□□□□□ -0.77
MSL3-201ENST00000312196 A0A0G2JMZ2 1700 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 USP17L10C9JJH3 530 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 TNPO2O14787 897 aaKnown RBP10.21□□□□□ -0.78
MSL3-201ENST00000312196 ADD2P35612 726 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 FLT3LGP49771 235 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 SPP2Q13103 211 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 NECAB2Q7Z6G3 386 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.78
MSL3-201ENST00000312196 GJD2Q9UKL4 321 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 SYNPO2Q9UMS6 1093 aa10.21□□□□□ -0.78
MSL3-201ENST00000312196 PLXNB2O15031 1838 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 IDH1O75874 414 aaKnown RBP10.2□□□□□ -0.78
MSL3-201ENST00000312196 INHAP05111 366 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 USP5P45974 858 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 CCDC17Q96LX7 622 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 ASCC2Q9H1I8 757 aaPredicted RBP10.2□□□□□ -0.78
MSL3-201ENST00000312196 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 COG6Q9Y2V7 657 aa10.2□□□□□ -0.78
MSL3-201ENST00000312196 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 MAPK4P31152 587 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 DYNLL1P63167 89 aaKnown RBP10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 DPF3Q92784 378 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.19□□□□□ -0.78
MSL3-201ENST00000312196 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 PAG1Q9NWQ8 432 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 GABRQQ9UN88 632 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 TRIM75PA6NK02 468 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 ZFYP08048 801 aaPredicted RBP10.19□□□□□ -0.78
MSL3-201ENST00000312196 LRRFIP1Q32MZ4 808 aaKnown RBP10.19□□□□□ -0.78
MSL3-201ENST00000312196 SBK1Q52WX2 424 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 TREML2Q5T2D2 321 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 USP6NLQ92738 828 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 RABGAP1Q9Y3P9 1069 aa10.19□□□□□ -0.78
MSL3-201ENST00000312196 GREB1LQ9C091 1923 aaPredicted RBP10.19□□□□□ -0.78
MSL3-201ENST00000312196 TTC41PQ6P2S7 1318 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 CYP2C8P10632 490 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 SHMT1P34896 483 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 GPATCH3Q96I76 525 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 GDF15Q99988 308 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 ANTXR1Q9H6X2 564 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 CABP5Q9NP86 173 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 ROBO3Q96MS0 1386 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms