RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
SOX30-202ENST00000311371 ITFG2Q969R8 447 aa18.27■□□□□ 0.52
SOX30-202ENST00000311371 TRIM10Q9UDY6 481 aa18.27■□□□□ 0.52
SOX30-202ENST00000311371 GUCA1BQ9UMX6 200 aa18.27■□□□□ 0.52
SOX30-202ENST00000311371 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.52
SOX30-202ENST00000311371 GUCY1A3Q02108 690 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 PPARDQ03181 441 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 TTMPQ5BVD1 217 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 MYSM1Q5VVJ2 828 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.51
SOX30-202ENST00000311371 HAUS2Q9NVX0 235 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.51
SOX30-202ENST00000311371 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
SOX30-202ENST00000311371 CHGBP05060 677 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 SEC24CP53992 1094 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 ZNF473Q8WTR7 871 aaKnown RBP18.26■□□□□ 0.51
SOX30-202ENST00000311371 ATP6V0A4Q9HBG4 840 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
SOX30-202ENST00000311371 CASP14P31944 242 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 KCNB1Q14721 858 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 NR1I3Q14994 352 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 CAGE1Q8TC20 777 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 NAA15Q9BXJ9 866 aaKnown RBP18.26■□□□□ 0.51
SOX30-202ENST00000311371 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
SOX30-202ENST00000311371 FDPSP14324 419 aaKnown RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 ACCSLQ4AC99 568 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 ARMC3Q5W041 872 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 FUKQ8N0W3 1084 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 TBC1D31Q96DN5 1066 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 OPA1O60313 960 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 ZNF18P17022 549 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 MRPS25P82663 173 aaKnown RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 STOX1Q6ZVD7 989 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 YTHDF3Q7Z739 585 aaKnown RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 NBPF5PQ86XG9 351 aaPredicted RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 LMBR1Q8WVP7 490 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 RSRC1Q96IZ7 334 aaKnown RBP18.25■□□□□ 0.51
SOX30-202ENST00000311371 C8orf76Q96K31 380 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
SOX30-202ENST00000311371 ATP2C2O75185 946 aa18.24■□□□□ 0.51
SOX30-202ENST00000311371 LSP1P33241 339 aa18.24■□□□□ 0.51
SOX30-202ENST00000311371 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
SOX30-202ENST00000311371 GOLGA6L7A0A1B0GV03 622 aa18.24■□□□□ 0.51
SOX30-202ENST00000311371 RWDD2BP57060 319 aa18.24■□□□□ 0.51
SOX30-202ENST00000311371 SKOR1P84550 965 aa18.24■□□□□ 0.51
SOX30-202ENST00000311371 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
SOX30-202ENST00000311371 SPDYE1Q8NFV5 336 aaPredicted RBP18.24■□□□□ 0.51
SOX30-202ENST00000311371 TARSL2A2RTX5 802 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 OPLAHO14841 1288 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 ATP1A1P05023 1023 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 RBBP5Q15291 538 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 ZC3H12AQ5D1E8 599 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 CCDC121Q6ZUS5 278 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 SAAL1Q96ER3 474 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 RNPC3Q96LT9 517 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 EPN3Q9H201 632 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 FAM184BQ9ULE4 1060 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 SNUPNO95149 360 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
SOX30-202ENST00000311371 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 COL15A1P39059 1388 aa18.23■□□□□ 0.51
SOX30-202ENST00000311371 MFAP3LO75121 409 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 CDC25CP30307 473 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 APBA1Q02410 837 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 TEFQ10587 303 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
SOX30-202ENST00000311371 PROSER2Q86WR7 435 aaPredicted RBP18.22■□□□□ 0.51
SOX30-202ENST00000311371 NUTM2AQ8IVF1 878 aaPredicted RBP18.22■□□□□ 0.51
SOX30-202ENST00000311371 CCDC50Q8IVM0 306 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 CCT8L2Q96SF2 557 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 RIPOR2Q9Y4F9 1068 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 SAR1BQ9Y6B6 198 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 PSMD2Q13200 908 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 FMN2Q9NZ56 1722 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 TOPAZ1Q8N9V7 1692 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
SOX30-202ENST00000311371 FXR1P51114 621 aaKnown RBP eCLIP18.22■□□□□ 0.51
SOX30-202ENST00000311371 SLC8A3P57103 927 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 ERVK-24P63145 666 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 ICA1Q05084 483 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 AENQ8WTP8 325 aaKnown RBP18.22■□□□□ 0.51
SOX30-202ENST00000311371 TFR2Q9UP52 801 aa18.22■□□□□ 0.51
SOX30-202ENST00000311371 ZNF185O15231 689 aa18.21■□□□□ 0.51
SOX30-202ENST00000311371 NNTQ13423 1086 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms