RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TMEM179Q6ZVK1 233 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 ZNF444Q8N0Y2 327 aaPredicted RBP21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 STAG1Q8WVM7 1258 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 DYNLL2Q96FJ2 89 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 CNNM2Q9H8M5 875 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 FZD1Q9UP38 647 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 PTH1RQ03431 593 aa21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 PPIL2Q13356 520 aa21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 PAXIP1Q6ZW49 1069 aaPredicted RBP21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 ELP3Q9H9T3 547 aa21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
SSSCA1-201ENST00000309328 USP17L5A8MUK1 530 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 PTPRAP18433 802 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 RASAL3Q86YV0 1011 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 OPTNQ96CV9 577 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 CLMNQ96JQ2 1002 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 CAPNS2Q96L46 248 aa21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
SSSCA1-201ENST00000309328 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 MAP2K2P36507 400 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 TRDNQ13061 729 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 SPRYD7Q5W111 196 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 SLC44A5Q8NCS7 719 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 WNK4Q96J92 1243 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 KRT23Q9C075 422 aa21.2■□□□□ 0.98
SSSCA1-201ENST00000309328 BAZ2AQ9UIF9 1905 aaKnown RBP21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 LAMB1P07942 1786 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 CXCL11O14625 94 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 GH2P01242 217 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 RASA1P20936 1047 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 GTF2A2P52657 109 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 INHBEP58166 350 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 HAND2P61296 217 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 ESR2Q92731 530 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 WDR18Q9BV38 432 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 SH2D4AQ9H788 454 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 KANSL2Q9H9L4 492 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 PLIN4Q96Q06 1357 aa21.19■□□□□ 0.98
SSSCA1-201ENST00000309328 MANSC4A6NHS7 340 aaPredicted RBP21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 GDF11O95390 407 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 MCCP23508 829 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 EVX2Q03828 476 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 CTDSPL2Q05D32 466 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 SREBF2Q12772 1141 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 SNAPC2Q13487 334 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 CCDC178Q5BJE1 867 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 ZNF280CQ8ND82 737 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 OTUD5Q96G74 571 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 SYNPO2Q9UMS6 1093 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 ZHX2Q9Y6X8 837 aa21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
SSSCA1-201ENST00000309328 FAM155AB1AL88 458 aaPredicted RBP21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 CYP21A2P08686 494 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 SLURP2P0DP57 97 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 KRT32Q14532 448 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 RRP1BQ14684 758 aaKnown RBP21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 CYP4F22Q6NT55 531 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 NEDD1Q8NHV4 660 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 KCNH4Q9UQ05 1017 aa21.17■□□□□ 0.98
SSSCA1-201ENST00000309328 TSPY2A6NKD2 308 aa21.16■□□□□ 0.98
SSSCA1-201ENST00000309328 AKR1B1P15121 316 aa21.16■□□□□ 0.98
SSSCA1-201ENST00000309328 TBC1D10CQ8IV04 446 aa21.16■□□□□ 0.98
SSSCA1-201ENST00000309328 ARHGEF10LQ9HCE6 1279 aa21.16■□□□□ 0.98
SSSCA1-201ENST00000309328 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
SSSCA1-201ENST00000309328 C19orf81C9J6K1 198 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 RANBP6O60518 1105 aaKnown RBP21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 PRDM1O75626 825 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 CETPP11597 493 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 VEGFBP49765 207 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 USP14P54578 494 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 TFAP4Q01664 338 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 ICA1Q05084 483 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 RALYLQ86SE5 291 aaKnown RBP21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 IQCA1Q86XH1 822 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
SSSCA1-201ENST00000309328 OTOFQ9HC10 1997 aa21.14■□□□□ 0.98
SSSCA1-201ENST00000309328 DOCK1Q14185 1865 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 USP17L10C9JJH3 530 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 SMIM22K7EJ46 135 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 IRF6O14896 467 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 SLC27A2O14975 620 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 HTRA3P83110 453 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 OTUD7BQ6GQQ9 843 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 FASTKD5Q7L8L6 764 aaKnown RBP21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 STK11IPQ8N1F8 1099 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 NCOA7Q8NI08 942 aa21.14■□□□□ 0.97
SSSCA1-201ENST00000309328 HSPA4P34932 840 aa21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 BACE1P56817 501 aa21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 SEPT2Q15019 361 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms