RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ASNSP08243 561 aa24.03■■□□□ 1.44
PDZRN3-202ENST00000308537 MLLT1Q03111 559 aaPredicted RBP24.03■■□□□ 1.44
PDZRN3-202ENST00000308537 HLA-DOAP06340 250 aa24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 HMGCS2P54868 508 aa24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 SDR42E1Q8WUS8 393 aa24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 DCP1AQ9NPI6 582 aaPredicted RBP24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 ECHDC1Q9NTX5 307 aa24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 GINM1Q9NU53 330 aa24.02■■□□□ 1.44
PDZRN3-202ENST00000308537 SHMT1P34896 483 aa24.01■■□□□ 1.43
PDZRN3-202ENST00000308537 TSHZ3Q63HK5 1081 aa24.01■■□□□ 1.43
PDZRN3-202ENST00000308537 CRACR2BQ8N4Y2 399 aaPredicted RBP24.01■■□□□ 1.43
PDZRN3-202ENST00000308537 ARMT1Q9H993 441 aa24.01■■□□□ 1.43
PDZRN3-202ENST00000308537 SERPINB13Q9UIV8 391 aa24.01■■□□□ 1.43
PDZRN3-202ENST00000308537 BACE1P56817 501 aa24■■□□□ 1.43
PDZRN3-202ENST00000308537 UBE3CQ15386 1083 aa24■■□□□ 1.43
PDZRN3-202ENST00000308537 ZNF333Q96JL9 665 aa24■■□□□ 1.43
PDZRN3-202ENST00000308537 CRNKL1Q9BZJ0 848 aaKnown RBP24■■□□□ 1.43
PDZRN3-202ENST00000308537 PRKAB2O43741 272 aa23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 GNRH1P01148 92 aa23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 PSMC4P43686 418 aa23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 MTMR2Q13614 643 aa23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 OTUD7AQ8TE49 926 aaPredicted RBP23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 SALL3Q9BXA9 1300 aa23.99■■□□□ 1.43
PDZRN3-202ENST00000308537 POTEFA5A3E0 1075 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 SMIM22K7EJ46 135 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 MBD4O95243 580 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 GH2P01242 217 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 OSBPP22059 807 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 TTC6Q86TZ1 520 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 PUS7LQ9H0K6 701 aaKnown RBP23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 AS3MTQ9HBK9 375 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 SRRDQ9UH36 339 aa23.98■■□□□ 1.43
PDZRN3-202ENST00000308537 ECM2O94769 699 aaPredicted RBP23.97■■□□□ 1.43
PDZRN3-202ENST00000308537 CYP2D6P10635 497 aa23.97■■□□□ 1.43
PDZRN3-202ENST00000308537 GUCY1A2P33402 732 aa23.97■■□□□ 1.43
PDZRN3-202ENST00000308537 ARHGEF6Q15052 776 aa23.97■■□□□ 1.43
PDZRN3-202ENST00000308537 PI4K2BQ8TCG2 481 aa23.97■■□□□ 1.43
PDZRN3-202ENST00000308537 MYH8P13535 1937 aa23.96■■□□□ 1.43
PDZRN3-202ENST00000308537 KIF22Q14807 665 aa23.96■■□□□ 1.43
PDZRN3-202ENST00000308537 ASCC2Q9H1I8 757 aaPredicted RBP23.96■■□□□ 1.43
PDZRN3-202ENST00000308537 EMILIN3Q9NT22 766 aa23.96■■□□□ 1.43
PDZRN3-202ENST00000308537 MCM9Q9NXL9 1143 aa23.96■■□□□ 1.43
PDZRN3-202ENST00000308537 HOXA7P31268 230 aaPredicted RBP23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 PRMT2P55345 433 aa23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 POTEEQ6S8J3 1075 aa23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 KBTBD3Q8NAB2 608 aa23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 TRIM34Q9BYJ4 488 aa23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.95■■□□□ 1.42
PDZRN3-202ENST00000308537 USP17L10C9JJH3 530 aa23.94■■□□□ 1.42
PDZRN3-202ENST00000308537 SLC44A5Q8NCS7 719 aa23.94■■□□□ 1.42
PDZRN3-202ENST00000308537 C19orf81C9J6K1 198 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 POLR3DP05423 398 aaPredicted RBP23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 FAM110CQ1W6H9 321 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 CERKLQ49MI3 558 aaPredicted RBP23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 ANKRD13CQ8N6S4 541 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 SMCR8Q8TEV9 937 aaPredicted RBP23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 SH3TC2Q8TF17 1288 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 C12orf42Q96LP6 360 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 ATP8A2Q9NTI2 1148 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 PNMA3Q9UL41 463 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 GABRQQ9UN88 632 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 PLXNB2O15031 1838 aa23.93■■□□□ 1.42
PDZRN3-202ENST00000308537 TTC41PQ6P2S7 1318 aa23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 PRKCZQ05513 592 aa23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 HDAC1Q13547 482 aaPredicted RBP23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 SLC9C1Q4G0N8 1177 aa23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 ACER1Q8TDN7 264 aa23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 OSBP2Q969R2 916 aa23.92■■□□□ 1.42
PDZRN3-202ENST00000308537 MYPNQ86TC9 1320 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 FMNL1O95466 1100 aaPredicted RBP23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 FCGRTP55899 365 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 ABCB5Q2M3G0 1257 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 C12orf60Q5U649 245 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 DYNLL2Q96FJ2 89 aa23.91■■□□□ 1.42
PDZRN3-202ENST00000308537 GREB1LQ9C091 1923 aaPredicted RBP23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 PEX10O60683 326 aa23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 STRBPQ96SI9 672 aaKnown RBP23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 P2RX7Q99572 595 aaKnown RBP23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 TXNRD2Q9NNW7 524 aa23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 MORF4L1Q9UBU8 362 aa23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 RLFQ13129 1914 aa23.9■■□□□ 1.42
PDZRN3-202ENST00000308537 GCLCP48506 637 aaPredicted RBP23.89■■□□□ 1.41
PDZRN3-202ENST00000308537 PABPC4Q13310 644 aaKnown RBP eCLIP23.89■■□□□ 1.41
PDZRN3-202ENST00000308537 ZSCAN25Q6NSZ9 544 aa23.89■■□□□ 1.41
PDZRN3-202ENST00000308537 KIAA1683Q9H0B3 1180 aa23.89■■□□□ 1.41
PDZRN3-202ENST00000308537 TMOD4Q9NZQ9 345 aa23.89■■□□□ 1.41
PDZRN3-202ENST00000308537 A0A1W2PRG0 241 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 USP17L12C9JPN9 530 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 USP17L21D6R901 530 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 SEPT2Q15019 361 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 USP17L2Q6R6M4 530 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 SIAH1Q8IUQ4 282 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 APPBP2Q92624 585 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 GPATCH3Q96I76 525 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 TAOK2Q9UL54 1235 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 SLC4A4Q9Y6R1 1079 aa23.88■■□□□ 1.41
PDZRN3-202ENST00000308537 GSG1L2A8MUP6 293 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 RNF113AO15541 343 aaKnown RBP23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms