RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ERCC6LQ2NKX8 1250 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
CSDC2-201ENST00000306149 DNAI1Q9UI46 699 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 FBXO38Q6PIJ6 1188 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 NFE2L3Q9Y4A8 694 aa17.33■□□□□ 0.36
CSDC2-201ENST00000306149 COL4A1P02462 1669 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 NTSR2O95665 410 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
CSDC2-201ENST00000306149 FAM53CQ9NYF3 392 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 CCP110O43303 1012 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 MYO1BO43795 1136 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
CSDC2-201ENST00000306149 AK7Q96M32 723 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 MED15Q96RN5 788 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
CSDC2-201ENST00000306149 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 WNT7AO00755 349 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 FANCGO15287 622 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 KCNQ4P56696 695 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 SIK1P57059 783 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 SMARCE1Q969G3 411 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 SAMSN1Q9NSI8 373 aaKnown RBP17.31■□□□□ 0.36
CSDC2-201ENST00000306149 LRP5O75197 1615 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 PLEKHA8P1O95397 391 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 ADAMTS2O95450 1211 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 AFMP43652 599 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 ADKP55263 362 aaKnown RBP17.31■□□□□ 0.36
CSDC2-201ENST00000306149 SEC23AQ15436 765 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 KRT222Q8N1A0 295 aa17.31■□□□□ 0.36
CSDC2-201ENST00000306149 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
CSDC2-201ENST00000306149 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
CSDC2-201ENST00000306149 V9GY48 417 aaPredicted RBP17.31■□□□□ 0.36
CSDC2-201ENST00000306149 A0A087X0B3 334 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 DHX58Q96C10 678 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 MYH2Q9UKX2 1941 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
CSDC2-201ENST00000306149 AKAP17AQ02040 695 aaKnown RBP17.3■□□□□ 0.36
CSDC2-201ENST00000306149 TMTC2Q8N394 836 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 ESR2Q92731 530 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 SRPRBQ9Y5M8 271 aaKnown RBP17.3■□□□□ 0.36
CSDC2-201ENST00000306149 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
CSDC2-201ENST00000306149 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
CSDC2-201ENST00000306149 TAF1P21675 1872 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
CSDC2-201ENST00000306149 PKN1Q16512 942 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 KLHL10Q6JEL2 608 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 STRCQ7RTU9 1775 aa17.29■□□□□ 0.36
CSDC2-201ENST00000306149 SARSP49591 514 aaKnown RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 STX17P56962 302 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 MORC3Q14149 939 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 DDB1Q16531 1140 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 SLC4A8Q2Y0W8 1093 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 TMEM139Q8IV31 216 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 STAMQ92783 540 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 NMT2O60551 498 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 RIOK1Q9BRS2 568 aaKnown RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 NID2Q14112 1375 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 BAZ2AQ9UIF9 1905 aaKnown RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 COBLO75128 1261 aa17.28■□□□□ 0.36
CSDC2-201ENST00000306149 H2AFXP16104 143 aaPredicted RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
CSDC2-201ENST00000306149 KCNQ2O43526 872 aa17.27■□□□□ 0.36
CSDC2-201ENST00000306149 URI1O94763 535 aaPredicted RBP17.27■□□□□ 0.36
CSDC2-201ENST00000306149 ZNF174Q15697 407 aa17.27■□□□□ 0.36
CSDC2-201ENST00000306149 IFIT1BQ5T764 474 aaKnown RBP17.27■□□□□ 0.36
CSDC2-201ENST00000306149 FCHSD1Q86WN1 690 aa17.27■□□□□ 0.36
CSDC2-201ENST00000306149 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
CSDC2-201ENST00000306149 MYH6P13533 1939 aa17.27■□□□□ 0.36
CSDC2-201ENST00000306149 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 TRIM75PA6NK02 468 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 ZNF18P17022 549 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 KLRK1P26718 216 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 MLKLQ8NB16 471 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 JAG2Q9Y219 1238 aa17.27■□□□□ 0.35
CSDC2-201ENST00000306149 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 NT5DC1Q5TFE4 455 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 TOGARAM2Q6ZUX3 1019 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 BAG1Q99933 345 aaPredicted RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 ZNF446Q9NWS9 450 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms