RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
TMEM88-201ENST00000301599 TNRC18O15417 2968 aaPredicted RBP22.09■■□□□ 1.13
TMEM88-201ENST00000301599 GRK4P32298 578 aa22.09■■□□□ 1.13
TMEM88-201ENST00000301599 ANKRD13CQ8N6S4 541 aa22.09■■□□□ 1.13
TMEM88-201ENST00000301599 HTTP42858 3142 aa22.08■■□□□ 1.13
TMEM88-201ENST00000301599 MYCP01106 439 aaPredicted RBP22.08■■□□□ 1.13
TMEM88-201ENST00000301599 POLR3DP05423 398 aaPredicted RBP22.08■■□□□ 1.13
TMEM88-201ENST00000301599 MTMR2Q13614 643 aa22.08■■□□□ 1.13
TMEM88-201ENST00000301599 HAUS7Q99871 368 aa22.08■■□□□ 1.13
TMEM88-201ENST00000301599 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.08■■□□□ 1.13
TMEM88-201ENST00000301599 ASCC2Q9H1I8 757 aaPredicted RBP22.08■■□□□ 1.13
TMEM88-201ENST00000301599 TCRBV5S4A2TA0A5A2 114 aa22.07■■□□□ 1.12
TMEM88-201ENST00000301599 TNPO2O14787 897 aaKnown RBP22.07■■□□□ 1.12
TMEM88-201ENST00000301599 HOXA7P31268 230 aaPredicted RBP22.07■■□□□ 1.12
TMEM88-201ENST00000301599 PRKCZQ05513 592 aa22.07■■□□□ 1.12
TMEM88-201ENST00000301599 FAM110CQ1W6H9 321 aa22.07■■□□□ 1.12
TMEM88-201ENST00000301599 EDC3Q96F86 508 aaKnown RBP22.07■■□□□ 1.12
TMEM88-201ENST00000301599 DCTPP1Q9H773 170 aa22.07■■□□□ 1.12
TMEM88-201ENST00000301599 BIN2Q9UBW5 565 aaPredicted RBP22.07■■□□□ 1.12
TMEM88-201ENST00000301599 KIAA0100Q14667 2235 aaKnown RBP22.07■■□□□ 1.12
TMEM88-201ENST00000301599 PDE4DIPQ5VU43 2346 aa22.07■■□□□ 1.12
TMEM88-201ENST00000301599 SMARCA5O60264 1052 aaPredicted RBP22.06■■□□□ 1.12
TMEM88-201ENST00000301599 GH2P01242 217 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 PLCD1P51178 756 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 SHROOM1Q2M3G4 852 aaPredicted RBP22.06■■□□□ 1.12
TMEM88-201ENST00000301599 CERKLQ49MI3 558 aaPredicted RBP22.06■■□□□ 1.12
TMEM88-201ENST00000301599 COA7Q96BR5 231 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 CABP5Q9NP86 173 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 GABRQQ9UN88 632 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 PTPRFP10586 1907 aa22.06■■□□□ 1.12
TMEM88-201ENST00000301599 CDK5RAP2Q96SN8 1893 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 FLT3LGP49771 235 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 UBXN2AP68543 259 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 IRX3P78415 501 aaPredicted RBP22.05■■□□□ 1.12
TMEM88-201ENST00000301599 PRPF38BQ5VTL8 546 aaKnown RBP22.05■■□□□ 1.12
TMEM88-201ENST00000301599 USP17L2Q6R6M4 530 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 MCM9Q9NXL9 1143 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 ZSWIM8A7E2V4 1837 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 FOCADQ5VW36 1801 aa22.05■■□□□ 1.12
TMEM88-201ENST00000301599 SIPA1L1O43166 1804 aa22.04■■□□□ 1.12
TMEM88-201ENST00000301599 ADD2P35612 726 aa22.04■■□□□ 1.12
TMEM88-201ENST00000301599 ABCB5Q2M3G0 1257 aa22.04■■□□□ 1.12
TMEM88-201ENST00000301599 SLAIN1Q8ND83 568 aa22.04■■□□□ 1.12
TMEM88-201ENST00000301599 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
TMEM88-201ENST00000301599 ADCY3O60266 1144 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 IRF5Q13568 498 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 MTFR1Q15390 333 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 ZSCAN25Q6NSZ9 544 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 LCORLQ8N3X6 602 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 PXYLP1Q8TE99 480 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 ARMT1Q9H993 441 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 DCP1AQ9NPI6 582 aaPredicted RBP22.03■■□□□ 1.12
TMEM88-201ENST00000301599 EMILIN3Q9NT22 766 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 ECHDC1Q9NTX5 307 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 ATAD5Q96QE3 1844 aa22.03■■□□□ 1.12
TMEM88-201ENST00000301599 MYH1P12882 1939 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 SHMT1P34896 483 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 RAB3GAP1Q15042 981 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 UBE3CQ15386 1083 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 NKX2-3Q8TAU0 364 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 SDR42E1Q8WUS8 393 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 ATP8A2Q9NTI2 1148 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 MORF4L1Q9UBU8 362 aa22.02■■□□□ 1.12
TMEM88-201ENST00000301599 CCL5P13501 91 aa22.01■■□□□ 1.11
TMEM88-201ENST00000301599 USP14P54578 494 aa22.01■■□□□ 1.11
TMEM88-201ENST00000301599 GABPAQ06546 454 aa22.01■■□□□ 1.11
TMEM88-201ENST00000301599 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
TMEM88-201ENST00000301599 CENPFP49454 3210 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 MBD4O95243 580 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 GJB1P08034 283 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 HERVK_113P62684 666 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 GPRC5AQ8NFJ5 357 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 GPATCH3Q96I76 525 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 FEZ1Q99689 392 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 RNF208Q9H0X6 261 aa22■■□□□ 1.11
TMEM88-201ENST00000301599 PRKAB2O43741 272 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 SLFNL1Q499Z3 407 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 GTF3C2Q8WUA4 911 aaPredicted RBP21.99■■□□□ 1.11
TMEM88-201ENST00000301599 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 C12orf42Q96LP6 360 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 KIAA1683Q9H0B3 1180 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 LOC285556D6RIA3 1793 aa21.99■■□□□ 1.11
TMEM88-201ENST00000301599 RBBP6Q7Z6E9 1792 aaKnown RBP21.99■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L15C9J2P7 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L13C9JLJ4 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L11C9JVI0 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L18D6R9N7 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L22D6RA61 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L17D6RBQ6 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L19D6RCP7 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L20D6RJB6 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 ELNP15502 786 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 USP17L24Q0WX57 530 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 AMOTL1Q8IY63 956 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 RBPJLQ9UBG7 517 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 SWAP70Q9UH65 585 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
TMEM88-201ENST00000301599 MGAMO43451 1857 aa21.97■■□□□ 1.11
TMEM88-201ENST00000301599 MPHOSPH10O00566 681 aaKnown RBP21.97■■□□□ 1.11
TMEM88-201ENST00000301599 GJA8P48165 433 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms