RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 NCAPHQ15003 741 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 KANK3Q6NY19 840 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 SMIM5Q71RC9 77 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 SYMPKQ92797 1274 aaKnown RBP19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 AK7Q96M32 723 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 MAP3K15Q6ZN16 1313 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 UBA7P41226 1012 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 CHMP4BP1P59074 171 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 TRIM47Q96LD4 638 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 RABEP2Q9H5N1 569 aa19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.75
CHRNA5-201ENST00000299565 CCDC194A0A1B0GVG4 234 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 USP17L12C9JPN9 530 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 USP17L21D6R901 530 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 PPP6R2O75170 966 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 CCDC152Q4G0S7 254 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 LEKR1Q6ZMV7 388 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 ACRBPQ8NEB7 543 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 RASGRP4Q8TDF6 673 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 ERLIN1O75477 346 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 KRT9P35527 623 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 PPARAQ07869 468 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 RBL2Q08999 1139 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 TANGO6Q9C0B7 1094 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 GOLGA6L9A6NEM1 432 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 MMP1P03956 469 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 USP5P45974 858 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 SMC1AQ14683 1233 aaKnown RBP19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 PSMB7Q99436 277 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 CDC5LQ99459 802 aaKnown RBP19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 ZHX3Q9H4I2 956 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 CALCOCO1Q9P1Z2 691 aa19.71■□□□□ 0.75
CHRNA5-201ENST00000299565 STAT6P42226 847 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 SRRTQ9BXP5 876 aaKnown RBP19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 DEF6Q9H4E7 631 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 RIPOR2Q9Y4F9 1068 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 CTAGE9A4FU28 777 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 PTGDRQ13258 359 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 TMTC2Q8N394 836 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 ENC1O14682 589 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 PLEKHA8P1O95397 391 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 CCDC178Q5BJE1 867 aa19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 ZNHIT6Q9NWK9 470 aaKnown RBP19.7■□□□□ 0.74
CHRNA5-201ENST00000299565 TRIM21P19474 475 aaKnown RBP19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 HEATR3Q7Z4Q2 680 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 AGXT2Q9BYV1 514 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 JADE2Q9NQC1 790 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 MORC2Q9Y6X9 1032 aaPredicted RBP19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 TFRCP02786 760 aaKnown RBP19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 TTC38Q5R3I4 469 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 IGDCC4Q8TDY8 1250 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 WDR17Q8IZU2 1322 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 FAM170AA1A519 330 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 IDEP14735 1019 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 LRP10Q7Z4F1 713 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 PARD6BQ9BYG5 372 aa19.69■□□□□ 0.74
CHRNA5-201ENST00000299565 XRN1Q8IZH2 1706 aaKnown RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 NMT2O60551 498 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 DZIP1Q86YF9 867 aaKnown RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 GPKOWQ92917 476 aaPredicted RBP eCLIP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 PLEKHA4Q9H4M7 779 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 MCM9Q9NXL9 1143 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CTAGE15A4D2H0 777 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CTAGE8P0CG41 777 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 IFNAR1P17181 557 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CTAGE6Q86UF2 777 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CTAGE4Q8IX94 777 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CCDC47Q96A33 483 aaKnown RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 EPB41L4AQ9HCS5 686 aaPredicted RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 ATG3Q9NT62 314 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 ZMYND10O75800 440 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 FMNL1O95466 1100 aaPredicted RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 MTIF2P46199 727 aaKnown RBP19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 STIM1Q13586 685 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 SYCP1Q15431 976 aa19.68■□□□□ 0.74
CHRNA5-201ENST00000299565 CAPN2P17655 700 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 AMOTL1Q8IY63 956 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 IQUBQ8NA54 791 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 UBR1Q8IWV7 1749 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
CHRNA5-201ENST00000299565 EFCAB8A8MWE9 144 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 C10orf67Q8IYJ2 551 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 BBXQ8WY36 941 aaPredicted RBP19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 MACROD2A1Z1Q3 448 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 GSG1L2A8MUP6 293 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 SLC35F6Q8N357 371 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 SOS2Q07890 1332 aaPredicted RBP19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 STX10O60499 249 aa19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 NOM1Q5C9Z4 860 aaKnown RBP19.66■□□□□ 0.74
CHRNA5-201ENST00000299565 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
CHRNA5-201ENST00000299565 KAT14Q9H8E8 782 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms