RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 SDF4Q9BRK5 362 aa15.22■□□□□ 0.03
PPP1CB-201ENST00000296122 RTFDC1Q9BY42 306 aaPredicted RBP15.22■□□□□ 0.03
PPP1CB-201ENST00000296122 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 AOC3Q16853 763 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 ELP1O95163 1332 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 ZBTB7AO95365 584 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
PPP1CB-201ENST00000296122 ZNF445P59923 1031 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 GRIK5Q16478 980 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 PPP4R3BQ5MIZ7 849 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 STRIP1Q5VSL9 837 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 CMTR1Q8N1G2 835 aaKnown RBP15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 PNMA1Q8ND90 353 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 JDP2Q8WYK2 163 aa15.21■□□□□ 0.02
PPP1CB-201ENST00000296122 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 NLRP5P59047 1200 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 MYSM1Q5VVJ2 828 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 DGKHQ86XP1 1220 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 RNF26Q9BY78 433 aaPredicted RBP15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 STK36Q9NRP7 1315 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 CRKP46108 304 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 SEC63Q9UGP8 760 aaKnown RBP15.2■□□□□ 0.02
PPP1CB-201ENST00000296122 FLT1P17948 1338 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 ZBTB22O15209 634 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 CDK8P49336 464 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 DACT1Q9NYF0 836 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 ARAP2Q8WZ64 1704 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 SPTLC2O15270 562 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 CAMK4Q16566 473 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 AIFM3Q96NN9 605 aa15.19■□□□□ 0.02
PPP1CB-201ENST00000296122 HHIPL2Q6UWX4 724 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 TCP10Q12799 353 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 SLC44A5Q8NCS7 719 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 MXD3Q9BW11 206 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 NMT2O60551 498 aa15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 KIF23Q02241 960 aaPredicted RBP15.18■□□□□ 0.02
PPP1CB-201ENST00000296122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■□□□□ 9.9
PPP1CB-201ENST00000296122 MYO1BO43795 1136 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 ANO1Q5XXA6 986 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 YEATS4O95619 227 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 KCNJ14Q9UNX9 436 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 PARP1P09874 1014 aaKnown RBP15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 KRT2P35908 639 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 PLCD1P51178 756 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 SEC23AQ15436 765 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 MRPS27Q92552 414 aaKnown RBP15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
PPP1CB-201ENST00000296122 IRS2Q9Y4H2 1338 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 DPEP1P16444 411 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CALML3P27482 149 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 GAKO14976 1311 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 hCG_1642624A0A1W2PR95 340 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CTAGE5O15320 804 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 DLGAP5Q15398 846 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 DALRD3Q5D0E6 543 aaKnown RBP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 RILPL1Q5EBL4 403 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 SMIM22K7EJ46 135 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 LZTS2Q9BRK4 669 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 VPS54Q9P1Q0 977 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
PPP1CB-201ENST00000296122 COL4A1P02462 1669 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 RAD17O75943 681 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 FAM13BQ9NYF5 915 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 MARCKSP29966 332 aaPredicted RBP15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 TMTC3Q6ZXV5 915 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 NOSTRINQ8IVI9 506 aa15.15■□□□□ 0.02
PPP1CB-201ENST00000296122 CKAP2LQ8IYA6 745 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms