RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 MIGA1Q8NAN2 632 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CCDC91Q7Z6B0 441 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 MYCBPQ99417 103 aaPredicted RBP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 VPS54Q9P1Q0 977 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 PCDHB6Q9Y5E3 794 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CAPN7Q9Y6W3 813 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CEP170BQ9Y4F5 1589 aaPredicted RBP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 HSF2BPO75031 334 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 A1BGP04217 495 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 GRIN1Q05586 938 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 TDRD12Q587J7 1177 aaKnown RBP16.05■□□□□ 0.16
VPS26B-201ENST00000281187 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 AKR1B10O60218 316 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 PPP6R2O75170 966 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 ZPR1O75312 459 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 MCM7P33993 719 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 PLCD1P51178 756 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 ANKRD18AQ8IVF6 992 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
VPS26B-201ENST00000281187 TFR2Q9UP52 801 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 MARCH6O60337 910 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 NLRP5P59047 1200 aa16.04■□□□□ 0.16
VPS26B-201ENST00000281187 PRDM1O75626 825 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 HPDP32754 393 aaPredicted RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 SPATA1Q5VX52 437 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 TRIM10Q9UDY6 481 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 ZMYM6O95789 1325 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 MYO1BO43795 1136 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 TUBBP07437 444 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 MAP2K2P36507 400 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 JAKMIP2Q96AA8 810 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
VPS26B-201ENST00000281187 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
VPS26B-201ENST00000281187 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.16
VPS26B-201ENST00000281187 SPAG1Q07617 926 aa16.02■□□□□ 0.16
VPS26B-201ENST00000281187 GBP6Q6ZN66 633 aa16.02■□□□□ 0.16
VPS26B-201ENST00000281187 CCDC42Q96M95 316 aa16.02■□□□□ 0.16
VPS26B-201ENST00000281187 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.16
VPS26B-201ENST00000281187 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.16
VPS26B-201ENST00000281187 TUBB4BP68371 445 aa16.02■□□□□ 0.15
VPS26B-201ENST00000281187 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.15
VPS26B-201ENST00000281187 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.15
VPS26B-201ENST00000281187 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.15
VPS26B-201ENST00000281187 COL15A1P39059 1388 aa16.02■□□□□ 0.15
VPS26B-201ENST00000281187 MFAP3LO75121 409 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 MBD4O95243 580 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 GGCXP38435 758 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 RSRC2Q7L4I2 434 aaKnown RBP16.01■□□□□ 0.15
VPS26B-201ENST00000281187 TADA2BQ86TJ2 420 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 CAPS2Q9BXY5 557 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 ARMT1Q9H993 441 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 SENP2Q9HC62 589 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 A2ML1A8K2U0 1454 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 FXR1P51114 621 aaKnown RBP eCLIP16.01■□□□□ 0.15
VPS26B-201ENST00000281187 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 EFCAB13Q8IY85 973 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 ADGRL3Q9HAR2 1447 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 GOLGA6L7A0A1B0GV03 622 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 CXCR5P32302 372 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 STAT6P42226 847 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 PACS2Q86VP3 889 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 IFT172Q9UG01 1749 aa16.01■□□□□ 0.15
VPS26B-201ENST00000281187 ZNF532Q9HCE3 1301 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 KRT83P78385 493 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 SLC7A5Q01650 507 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 CYP27A1Q02318 531 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 NELFBQ8WX92 580 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 ANKZF1Q9H8Y5 726 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
VPS26B-201ENST00000281187 PAK1Q13153 545 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 CCDC178Q5BJE1 867 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 FBXW10Q5XX13 1052 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 TOM1L2Q6ZVM7 507 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 CACNA2D4Q7Z3S7 1137 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 SCLT1Q96NL6 688 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 SLC52A2Q9HAB3 445 aa16■□□□□ 0.15
VPS26B-201ENST00000281187 KAT6BQ8WYB5 2073 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms