RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 GSDMAQ96QA5 445 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 SUGCTQ9HAC7 445 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 AFDNP55196 1824 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 ATP2B1P20020 1258 aa14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 CASP14P31944 242 aa14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 LIFRP42702 1097 aa14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 CKAP4Q07065 602 aaKnown RBP14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 ZNF827Q17R98 1081 aa14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 PUS7LQ9H0K6 701 aaKnown RBP14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 IQSEC3Q9UPP2 1182 aaPredicted RBP14.02□□□□□ -0.16
CHMP2B-201ENST00000263780 PHACTR2O75167 634 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 IFNAR1P17181 557 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 USP14P54578 494 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 FOXR1Q6PIV2 292 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 DIS3L2Q8IYB7 885 aaKnown RBP14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 XAGE2Q96GT9 111 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 MED15Q96RN5 788 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
CHMP2B-201ENST00000263780 C5P01031 1676 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 PHKG2P15735 406 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 AMPD2Q01433 879 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CYB5R4Q7L1T6 521 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 TADA2BQ86TJ2 420 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CDC5LQ99459 802 aaKnown RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CRACR2AQ9BSW2 395 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CAMTA1Q9Y6Y1 1673 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 SF3B2Q13435 895 aaKnown RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 STIM1Q13586 685 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CUL4BQ13620 913 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 TTF1Q15361 905 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
CHMP2B-201ENST00000263780 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 BTBD18B2RXH4 712 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 BMP15O95972 392 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 GYPCP04921 128 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 TOB1P50616 345 aaPredicted RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 ESCO1Q5FWF5 840 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 MMS22LQ6ZRQ5 1243 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 ABHD10Q9NUJ1 306 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 LRRC10BA6NIK2 292 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 A6NNZ2 444 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 PSMD14O00487 310 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 SYF2O95926 243 aaKnown RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 USP8P40818 1118 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 ARHGAP25P42331 645 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 ZAP70P43403 619 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 TUBB8Q3ZCM7 444 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 IQCEQ6IPM2 695 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 TRAPPC11Q7Z392 1133 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 NOA1Q8NC60 698 aaKnown RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 ACRBPQ8NEB7 543 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 COG1Q8WTW3 980 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 DCAF5Q96JK2 942 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 MYCBPQ99417 103 aaPredicted RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 NCAPGQ9BPX3 1015 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 LY9Q9HBG7 655 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
CHMP2B-201ENST00000263780 HPCAL4Q9UM19 191 aa14□□□□□ -0.17
CHMP2B-201ENST00000263780 N4BP3O15049 544 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 PRPF6O94906 941 aaKnown RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 APPP05067 770 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 RXRAP19793 462 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 KLHL10Q6JEL2 608 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 FAM76AQ8TAV0 307 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 SHOX2O60902 331 aaPredicted RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 ADD2P35612 726 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 FXR1P51114 621 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 SWT1Q5T5J6 900 aaKnown RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 GRAMD1CQ8IYS0 662 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms