RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SARM1Q6SZW1 724 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 JADE2Q9NQC1 790 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 SOWAHDA6NJG2 315 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 PDE8AO60658 829 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 ENGASEQ8NFI3 743 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 LPIN2Q92539 896 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 RPGRQ92834 1020 aaKnown RBP18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 TIGD1Q96MW7 591 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 SYNRGQ9UMZ2 1314 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 SH2B2O14492 632 aaPredicted RBP18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 DEXIO95424 95 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 OAS2P29728 719 aaKnown RBP18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 SMIM5Q71RC9 77 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 TTLL11Q8NHH1 800 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 RASGRP4Q8TDF6 673 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 RUFY1Q96T51 708 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 TNKSO95271 1327 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 MCM9Q9NXL9 1143 aa18.36■□□□□ 0.53
PDZRN3-201ENST00000263666 PATL2C9JE40 543 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 MAN1B1Q9UKM7 699 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 TOGARAM2Q6ZUX3 1019 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 DDX41Q9UJV9 622 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 KIF20AO95235 890 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 DNAJC21Q5F1R6 531 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 PIGBQ92521 554 aa18.35■□□□□ 0.53
PDZRN3-201ENST00000263666 KANK3Q6NY19 840 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 USP17L21D6R901 530 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 EIF3JO75822 258 aaKnown RBP18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 KRT9P35527 623 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 CCDC181Q5TID7 509 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 ANKRD7Q92527 254 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
PDZRN3-201ENST00000263666 MACROD2A1Z1Q3 448 aa18.33■□□□□ 0.53
PDZRN3-201ENST00000263666 PDE4BQ07343 736 aa18.33■□□□□ 0.53
PDZRN3-201ENST00000263666 SOGA3Q5TF21 947 aa18.33■□□□□ 0.53
PDZRN3-201ENST00000263666 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.53
PDZRN3-201ENST00000263666 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.53
PDZRN3-201ENST00000263666 CTAGE15A4D2H0 777 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 CTAGE8P0CG41 777 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 CTAGE6Q86UF2 777 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 CTAGE4Q8IX94 777 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 ACBD3Q9H3P7 528 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 GOLGA6L9A6NEM1 432 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 CASP14P31944 242 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 PPARAQ07869 468 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 WWC2Q6AWC2 1192 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 MLKLQ8NB16 471 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 ACRBPQ8NEB7 543 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 GPR108Q9NPR9 543 aa18.33■□□□□ 0.52
PDZRN3-201ENST00000263666 ENC1O14682 589 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 TEX33O43247 280 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 TTC38Q5R3I4 469 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 GIGYF2Q6Y7W6 1299 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 C10orf67Q8IYJ2 551 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 CAPN2P17655 700 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 EPS15P42566 896 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 ARID5AQ03989 594 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 ZNF444Q8N0Y2 327 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 WDR24Q96S15 920 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 UTYO14607 1347 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 CCDC148Q8NFR7 591 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 CRACR2AQ9BSW2 395 aa18.32■□□□□ 0.52
PDZRN3-201ENST00000263666 ZMYND10O75800 440 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 CIAO1O76071 339 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 IBSPP21815 317 aaPredicted RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 TMTC2Q8N394 836 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 CTIFO43310 598 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 PTGDRQ13258 359 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 SMC1AQ14683 1233 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms