RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CLTCQ00610 1675 aaKnown RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 CALM1P0DP23 149 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 CALM2P0DP24 149 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 CALM3P0DP25 149 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 OTUD6BQ8N6M0 293 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 EHBP1Q8NDI1 1231 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 NRKQ7Z2Y5 1582 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 COPB1P53618 953 aaKnown RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 KRT83P78385 493 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 SDR42E1Q8WUS8 393 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 JAKMIP2Q96AA8 810 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 GREM2Q9H772 168 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 PNMA6AP0CW24 399 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 AMPD3Q01432 767 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 PDE4DQ08499 809 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 CRACR2BQ8N4Y2 399 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 PDE11AQ9HCR9 933 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 SHPRHQ149N8 1683 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 LETM2Q2VYF4 491 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 CYP26C1Q6V0L0 522 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 ST7Q9NRC1 585 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 ARAP3Q8WWN8 1544 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 TLDC2A0PJX2 215 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 IVLP07476 585 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 BCAMP50895 628 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 ARMCX5Q6P1M9 558 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 OR8K1Q8NGG5 319 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 PIH1D3Q9NQM4 214 aaKnown RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 EBAG9O00559 213 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 BAG3O95817 575 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 GTF2A1P52655 376 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 SPATA5Q8NB90 893 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 FANCBQ8NB91 859 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 KRT86O43790 486 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 LDHCP07864 332 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 TSPY3P0CV98 308 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 TSPY8P0CW00 308 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 SF3A3Q12874 501 aaKnown RBP eCLIP5.19□□□□□ -1.582e-8■■■■□ 21.7
VPS13C-201ENST00000249837 SND1Q7KZF4 910 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 ANKRD13CQ8N6S4 541 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 TTF2Q9UNY4 1162 aaKnown RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 COL3A1P02461 1466 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 ADGRB1O14514 1584 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 LONRF2Q1L5Z9 754 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 SETDB2Q96T68 719 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 RPN1P04843 607 aaKnown RBP5.19□□□□□ -1.58
VPS13C-201ENST00000249837 LPIN2Q92539 896 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 DEXIO95424 95 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 KCNJ12Q14500 433 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 BRD3Q15059 726 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 RGS22Q8NE09 1264 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 AFAP1L1Q8TED9 768 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 DPF2Q92785 391 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 FERMT2Q96AC1 680 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 PUS7LQ9H0K6 701 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 ZCCHC17Q9NP64 241 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 ARHGAP31Q2M1Z3 1444 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 A0A0G2JLW4 131 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 HSPA2P54652 639 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 KMT5BQ4FZB7 885 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 SYNE4Q8N205 404 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 NOC4LQ9BVI4 516 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 SNAP23O00161 211 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 CASP1P29466 404 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 VSTM4Q8IW00 320 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 GPR161Q8N6U8 529 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 ZMYND10O75800 440 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 MORC3Q14149 939 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 CYP2D7A0A087X1C5 515 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 TRAF5O00463 557 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 AP5Z1O43299 807 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 PRKAB2O43741 272 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 PDE8AO60658 829 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 LDHBP07195 334 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 SPATA1Q5VX52 437 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 DHX40Q8IX18 779 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 SPAG5Q96R06 1193 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 RASSF4Q9H2L5 321 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 GYG1P46976 350 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 RAPGEF1Q13905 1077 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 SCARF1Q14162 830 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 IQCB1Q15051 598 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 UTP14CQ5TAP6 766 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 VPS36Q86VN1 386 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 C2CD5Q86YS7 1000 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 DYDC1Q8WWB3 177 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 NGLY1Q96IV0 654 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 HPDP32754 393 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 RAD51AP2Q09MP3 1159 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 TEX11Q8IYF3 940 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 FAM76AQ8TAV0 307 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 RBM28Q9NW13 759 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 GUCY2FP51841 1108 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 PICALMQ13492 652 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 CSRNP2Q9H175 543 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 TBC1D7Q9P0N9 293 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 DDX41Q9UJV9 622 aaKnown RBP5.18□□□□□ -1.58
VPS13C-201ENST00000249837 PLEKHG1Q9ULL1 1385 aa5.18□□□□□ -1.58
VPS13C-201ENST00000249837 USP17L12C9JPN9 530 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms