RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Hsd3b7Q9EQC1 369 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 LratQ9JI60 231 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Trp53inp1Q9QXE4 239 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tpm3-rs7D3Z2H9 248 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tmem165P52875 323 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Chp1P61022 195 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Washc4Q3UMB9 1173 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 PreplQ8C167 725 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Taf6lQ8R2K4 616 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 ParnQ8VDG3 624 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Fam217aQ9D9W6 419 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Sycp2lA0A0M3U1B0 842 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ccdc148Q6P5U8 527 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Akap8Q9DBR0 687 aaKnown RBP16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 CenphQ9QYM8 241 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Myo5bP21271 1818 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Il27raO70394 623 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dnm1P39053 867 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Sdc2P43407 202 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Gucy2cQ3UWA6 1072 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Fchsd1Q6PFY1 688 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tldc1Q8K0P3 455 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Polr2dQ9D7M8 142 aaKnown RBP16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Plekho1Q9JIY0 408 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Cdc45Q9Z1X9 566 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Zfp275G3X904 499 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Arhgap44Q5SSM3 814 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 DbnlQ62418 436 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Krt42Q6IFX2 452 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dzip1Q8BMD2 852 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Aldh5a1Q8BWF0 523 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Mb21d2Q8C525 428 aa16.61■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Cplx4Q80WM3 160 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Rassf2Q8BMS9 326 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Vmn1r218Q8R261 298 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Mfap3lQ9D3X9 409 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Igsf1Q7TQA1 1317 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Meis3P97368 378 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Rap1gap2Q5SVL6 712 aaKnown RBP16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tsr1Q5SWD9 803 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dusp9Q7TNL7 452 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Pcdha7Q91Y13 937 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Six6os1Q9CTN5 574 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Robo1O89026 1612 aa16.6■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Exosc10P56960 887 aaKnown RBP16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ddr1Q03146 911 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dnph1Q80VJ3 173 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Als2cr12Q8BVM7 383 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tango6Q8C3S2 1079 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 HdlbpQ8VDJ3 1268 aaKnown RBP16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Gli3Q61602 1583 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Odf2A3KGV1 830 aaKnown RBP16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Zfand4D3Z3C6 739 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Sec24cG3X972 1096 aaKnown RBP16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Lrrc4bP0C192 709 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ccdc129Q14B48 1034 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Pex1Q5BL07 1284 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ankrd24Q80VM7 985 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tmem67Q8BR76 992 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dhx58Q99J87 678 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 RpainQ9CWY9 219 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Gm28042B7ZCM9 1014 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nrg3O35181 713 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Adssl1P28650 457 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Rufy1Q8BIJ7 712 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Golim4Q8BXA1 655 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 MyripQ8K3I4 856 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Vps16Q920Q4 839 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Dbndd2Q9CRD4 158 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Tmem39aQ9CYC3 486 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Stat2Q9WVL2 923 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Siglec1Q62230 1695 aa16.59■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Cyp2j7A0A140T8U1 504 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Etnk2A7MCT6 385 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Sorbs1Q62417 1290 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Usp49Q6P9L4 685 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Naa35Q6PHQ8 725 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Sar1bQ9CQC9 198 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Stag1Q9D3E6 1258 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ugt1a8D3Z748 530 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ugt1a10E9PXN7 530 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gm29094F6Q785 221 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Cyp2d10P24456 504 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gfpt1P47856 697 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Rnpc3Q3UZ01 514 aaKnown RBP16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ift88Q61371 824 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Cct6bQ61390 531 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Rbm17Q8JZX4 405 aaKnown RBP16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Spats2Q8K1N4 545 aaKnown RBP16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Mis18aQ9CZJ6 204 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 MthfsQ9D110 203 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Thap2Q9D305 217 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 4930449I24RikQ9D5E3 319 aa16.58■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ccng2O08918 344 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Il7P10168 154 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ift122Q6NWV3 1182 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Zranb3Q6NZP1 1069 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Eif3hQ91WK2 352 aaKnown RBP16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 RarsQ9D0I9 660 aaKnown RBP16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Golgb1E9PVZ8 3238 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms