RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 DnttP09838 530 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Znf667Q2TL60 609 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Srek1Q8BZX4 494 aaKnown RBP16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Paf1Q8K2T8 535 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gpr108Q91WD0 569 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Vps16Q920Q4 839 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Nfil3O08750 462 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Prpf4bQ61136 1007 aaKnown RBP16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Pcsk7Q61139 770 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Lrrc15Q80X72 579 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Ano3A2AHL1 981 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Zscan29E9Q5B4 869 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Grin1P35438 938 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Ezh2Q61188 746 aaKnown RBP16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Homer1Q9Z2Y3 366 aa16.75■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Ubr3Q5U430 1889 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Usp5P56399 858 aaKnown RBP16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Slc27a1Q60714 646 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Mical1Q8VDP3 1048 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Dusp10Q9ESS0 483 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Mmel1Q9JLI3 765 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Tbc1d8bA3KGB4 1114 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Zbtb39Q6PDK0 712 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Dnaaf2Q8BPI1 814 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gimap7Q8R379 293 aa16.74■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Ccng2O08918 344 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Fam89aQ14BJ1 175 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Kmt5bQ3U8K7 883 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gm28047Q3US59 414 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 C87499Q3UX49 493 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Pla2g12bQ99P27 195 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Snw1Q9CSN1 536 aaKnown RBP16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 UvssaQ9D479 717 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Mtx1P47802 317 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gjb4Q02738 266 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Tbc1d30Q69ZT9 766 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Cyp4x1Q6A152 507 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Add3Q9QYB5 706 aaKnown RBP16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Col20a1Q923P0 1320 aa16.73■□□□□ 0.27
Rnf4-207ENSMUST00000182709 XpcP51612 930 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Tomm22Q9CPQ3 142 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 GdaQ9R111 454 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Lbhd1A0A087WPA0 259 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Brpf3B2KF05 1204 aaKnown RBP16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 AsnsQ61024 561 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Madcam1Q61826 405 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Rec8Q8C5S7 591 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Bend4P86174 541 aa16.72■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Igsf9bE9PZ19 1328 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Dhx8A2A4P0 1244 aaKnown RBP16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 A430078G23RikE9Q7Y4 484 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Traf3ip1Q149C2 625 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Kcnf1Q7TSH7 493 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Stac3Q8BZ71 360 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Cdk8Q8R3L8 464 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Apobec3Q99J72 440 aaKnown RBP16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gm973E9Q295 1059 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Usp17lbE9Q9U0 468 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Gm10134F6ZQC6 126 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Atp2b1G5E829 1220 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Wnt7aP24383 349 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 CebpzP53569 1052 aaKnown RBP16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Eya3P97480 510 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Esyt2Q3TZZ7 845 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Cep63Q3UPP8 700 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Ckap2Q3V1H1 664 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 SrcapA0A087WQ44 3271 aa16.71■□□□□ 0.27
Rnf4-207ENSMUST00000182709 Col22a1E9Q7P1 1613 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Gm30191A0A0U1RNT7 187 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Alppl2P24823 529 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Pfkfb1P70266 471 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Nucb2P81117 420 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Mtcl1Q3UHU5 1945 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Pnpla6Q3TRM4 1355 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Fam178bQ24JP3 464 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ctdspl2Q8BG15 465 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Evc2Q8K1G2 1220 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cnpy2Q9QXT0 182 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Zmym2Q9CU65 1376 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Phldb3E9QAF4 648 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ppef2O35385 757 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Copb2O55029 905 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cep131Q62036 1060 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ift122Q6NWV3 1182 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Usp49Q6P9L4 685 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Zfp202Q8C879 641 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Wasf1Q8R5H6 559 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Washc1Q8VDD8 475 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Gpaa1Q9WTK3 621 aa16.7■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Prl2c1Q5SVL9 228 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Best3Q6H1V1 669 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Dusp9Q7TNL7 452 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Sept14Q9DA97 430 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Tob2Q9JM55 345 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Wdr19Q3UGF1 1341 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 EgfrQ01279 1210 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Vps37dQ810I0 261 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Haus7Q8BKT8 364 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Nod2Q8K3Z0 1020 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cd248Q91V98 765 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms