RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Fam229aB2KGE5 128 aa13.01□□□□□ -0.33
Smarcc1-201ENSMUST00000088716 A730071L15RikQ8C4X0 137 aa13□□□□□ -0.33
Smarcc1-201ENSMUST00000088716 PcntP48725 2898 aa12.98□□□□□ -0.33
Smarcc1-201ENSMUST00000088716 Dnah12Q3V0Q1 3086 aa12.97□□□□□ -0.33
Smarcc1-201ENSMUST00000088716 Hectd1Q69ZR2 2618 aaKnown RBP12.96□□□□□ -0.33
Smarcc1-201ENSMUST00000088716 Krtap29-1A2A5X4 342 aa12.94□□□□□ -0.34
Smarcc1-201ENSMUST00000088716 Camk2n1Q6QWF9 78 aa12.92□□□□□ -0.34
Smarcc1-201ENSMUST00000088716 HrnrQ8VHD8 2496 aa12.92□□□□□ -0.34
Smarcc1-201ENSMUST00000088716 Ep400Q8CHI8 3072 aaKnown RBP12.88□□□□□ -0.35
Smarcc1-201ENSMUST00000088716 Sec61bQ9CQS8 96 aaKnown RBP12.88□□□□□ -0.35
Smarcc1-201ENSMUST00000088716 Notch1Q01705 2531 aa12.88□□□□□ -0.35
Smarcc1-201ENSMUST00000088716 Prune2Q52KR3 3084 aa12.83□□□□□ -0.36
Smarcc1-201ENSMUST00000088716 Gm5767A0A0J9YTU8 78 aa12.81□□□□□ -0.36
Smarcc1-201ENSMUST00000088716 Stab1Q8R4Y4 2571 aa12.8□□□□□ -0.36
Smarcc1-201ENSMUST00000088716 Gm3646F6S692 53 aa12.79□□□□□ -0.36
Smarcc1-201ENSMUST00000088716 Prrc2cQ3TLH4 2846 aaKnown RBP12.7□□□□□ -0.38
Smarcc1-201ENSMUST00000088716 2310050C09RikG5E8Z3 280 aa12.7□□□□□ -0.38
Smarcc1-201ENSMUST00000088716 Rpl37Q9D823 97 aa12.7□□□□□ -0.38
Smarcc1-201ENSMUST00000088716 Krtap13O88375 197 aa12.69□□□□□ -0.38
Smarcc1-201ENSMUST00000088716 Cep350E9Q309 3095 aa12.67□□□□□ -0.38
Smarcc1-201ENSMUST00000088716 UtrnE9Q6R7 3430 aa12.64□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Romo1P60603 79 aa12.63□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Gm9507D3Z5T3 223 aa12.62□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 BC029722A0A0N4SW31 51 aa12.61□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Jbts17Q8CE72 3214 aa12.6□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 NipblQ6KCD5 2798 aaKnown RBP12.59□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Gm19426M0QWC7 77 aa12.59□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Akap13E9Q394 2776 aa12.59□□□□□ -0.39
Smarcc1-201ENSMUST00000088716 Kmt2bO08550 2713 aa12.58□□□□□ -0.4
Smarcc1-201ENSMUST00000088716 TrioQ0KL02 3102 aa12.5□□□□□ -0.41
Smarcc1-201ENSMUST00000088716 Mast4Q811L6 2618 aa12.49□□□□□ -0.41
Smarcc1-201ENSMUST00000088716 Krtap14O08640 167 aa12.49□□□□□ -0.41
Smarcc1-201ENSMUST00000088716 Itpr3P70227 2670 aa12.46□□□□□ -0.41
Smarcc1-201ENSMUST00000088716 Itpr1P11881 2749 aa12.46□□□□□ -0.41
Smarcc1-201ENSMUST00000088716 Gm10382Q3V0T5 144 aa12.45□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 2310061N02RikQ9D6S9 174 aa12.44□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Bod1lE9Q6J5 3032 aa12.44□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Map1aQ9QYR6 2776 aa12.43□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Gm2310J3QNJ2 377 aa12.43□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Igsf10Q3V1M1 2594 aa12.41□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Krtap10-4Q08EG8 221 aa12.41□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 4933415A04RikQ9D443 101 aa12.41□□□□□ -0.42
Smarcc1-201ENSMUST00000088716 Rps29P62274 56 aa12.38□□□□□ -0.43
Smarcc1-201ENSMUST00000088716 Tnrc18Q80WC3 2878 aa12.36□□□□□ -0.43
Smarcc1-201ENSMUST00000088716 Tep1P97499 2629 aa12.33□□□□□ -0.44
Smarcc1-201ENSMUST00000088716 1700042G07RikB1AUF7 90 aa12.28□□□□□ -0.44
Smarcc1-201ENSMUST00000088716 Chd7A2AJK6 2986 aaKnown RBP12.28□□□□□ -0.44
Smarcc1-201ENSMUST00000088716 MgaA2AWL7 3003 aaKnown RBP12.27□□□□□ -0.44
Smarcc1-201ENSMUST00000088716 Myo15bI7HPW8 3033 aa12.27□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Tnp2P11378 117 aa12.27□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Col12a1Q60847 3120 aa12.27□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Ubr5Q80TP3 2792 aa12.26□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 9530053A07RikE9PVG8 2581 aa12.26□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Krtap10-10A0A1W2P7T6 217 aa12.25□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Lama3Q61789 3330 aa12.23□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Chd6A3KFM7 2711 aa12.21□□□□□ -0.45
Smarcc1-201ENSMUST00000088716 Cox6b2Q80ZN9 88 aa12.17□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Ash1lQ99MY8 2958 aa12.17□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Stab2Q8R4U0 2559 aa12.17□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Lama2Q60675 3118 aaKnown RBP12.15□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Dmxl1Q6PNC0 3013 aa12.15□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Fbn2Q61555 2907 aa12.15□□□□□ -0.46
Smarcc1-201ENSMUST00000088716 Nbeal2Q6ZQA0 2742 aa12.1□□□□□ -0.47
Smarcc1-201ENSMUST00000088716 Rev3lQ61493 3122 aa12.08□□□□□ -0.48
Smarcc1-201ENSMUST00000088716 Mki67E9PVX6 3177 aaKnown RBP12.07□□□□□ -0.48
Smarcc1-201ENSMUST00000088716 Gm7173A0A0G2JEB6 3132 aa12.05□□□□□ -0.48
Smarcc1-201ENSMUST00000088716 SmcpP15265 143 aa12.04□□□□□ -0.48
Smarcc1-201ENSMUST00000088716 Pkd1l1Q8R526 2615 aa11.99□□□□□ -0.49
Smarcc1-201ENSMUST00000088716 D6Ertd527eA0A0N4SWI3 464 aa11.99□□□□□ -0.49
Smarcc1-201ENSMUST00000088716 KalrnA2CG49 2964 aa11.95□□□□□ -0.5
Smarcc1-201ENSMUST00000088716 Gm2696A0A1W2P709 240 aa11.94□□□□□ -0.5
Smarcc1-201ENSMUST00000088716 HttP42859 3119 aa11.94□□□□□ -0.5
Smarcc1-201ENSMUST00000088716 Muc2Q80Z19 2680 aa11.88□□□□□ -0.51
Smarcc1-201ENSMUST00000088716 Ranbp2Q9ERU9 3053 aaKnown RBP11.87□□□□□ -0.51
Smarcc1-201ENSMUST00000088716 Col6a5A6H584 2640 aa11.86□□□□□ -0.51
Smarcc1-201ENSMUST00000088716 Gm21887J3QQ04 176 aa11.8□□□□□ -0.52
Smarcc1-201ENSMUST00000088716 Usp34Q6ZQ93 3582 aa11.78□□□□□ -0.52
Smarcc1-201ENSMUST00000088716 Itpr2Q9Z329 2701 aa11.77□□□□□ -0.53
Smarcc1-201ENSMUST00000088716 Hivep1Q03172 2688 aa11.76□□□□□ -0.53
Smarcc1-201ENSMUST00000088716 FcgbpE9Q0B5 2583 aa11.75□□□□□ -0.53
Smarcc1-201ENSMUST00000088716 Gm5965D3Z724 196 aa11.71□□□□□ -0.53
Smarcc1-201ENSMUST00000088716 Celsr1O35161 3034 aa11.64□□□□□ -0.55
Smarcc1-201ENSMUST00000088716 2310057N15RikQ9D6T8 200 aa11.6□□□□□ -0.55
Smarcc1-201ENSMUST00000088716 Cfap54Q8C6S9 3106 aa11.59□□□□□ -0.55
Smarcc1-201ENSMUST00000088716 Cdh23Q99PF4 3354 aa11.59□□□□□ -0.55
Smarcc1-201ENSMUST00000088716 TgO08710 2766 aa11.58□□□□□ -0.56
Smarcc1-201ENSMUST00000088716 Tex15F8VPN2 2785 aa11.55□□□□□ -0.56
Smarcc1-201ENSMUST00000088716 Ndufaf8A2AMZ4 74 aa11.54□□□□□ -0.56
Smarcc1-201ENSMUST00000088716 Utp20Q5XG71 2788 aaKnown RBP11.52□□□□□ -0.57
Smarcc1-201ENSMUST00000088716 Srrm2Q8BTI8 2703 aaKnown RBP11.49□□□□□ -0.57
Smarcc1-201ENSMUST00000088716 Tnp1P10856 55 aa11.49□□□□□ -0.57
Smarcc1-201ENSMUST00000088716 Igfn1Q3KNY0 2849 aa11.45□□□□□ -0.58
Smarcc1-201ENSMUST00000088716 AspmQ8CJ27 3122 aa11.43□□□□□ -0.58
Smarcc1-201ENSMUST00000088716 Gm40193A0A1B0GT39 78 aa11.39□□□□□ -0.59
Smarcc1-201ENSMUST00000088716 AtmQ62388 3066 aa11.39□□□□□ -0.59
Smarcc1-201ENSMUST00000088716 BptfA2A654 3036 aaKnown RBP11.39□□□□□ -0.59
Smarcc1-201ENSMUST00000088716 Vps13aQ5H8C4 3166 aa11.38□□□□□ -0.59
Smarcc1-201ENSMUST00000088716 ApcQ61315 2845 aa11.36□□□□□ -0.59
Smarcc1-201ENSMUST00000088716 Tenm4Q3UHK6 2771 aa11.33□□□□□ -0.6
Smarcc1-201ENSMUST00000088716 Frem2Q6NVD0 3160 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms