RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-221ENST00000640341 TOB1P50616 345 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-221ENST00000640341 TRIM28Q13263 835 aaKnown RBP16.73■□□□□ 0.27
SCARB2-221ENST00000640341 MAN1B1Q9UKM7 699 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 POLR3GO15318 223 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 HOOK1Q9UJC3 728 aaKnown RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 ACSBG1Q96GR2 724 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 BAG1Q99933 345 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-221ENST00000640341 ZNF446Q9NWS9 450 aa16.72■□□□□ 0.27
SCARB2-221ENST00000640341 CYP7A1P22680 504 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 CLCN6P51797 869 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 VGLL2Q8N8G2 317 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 LZTFL1Q9NQ48 299 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 MMP1P03956 469 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-221ENST00000640341 TOGARAM2Q6ZUX3 1019 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-221ENST00000640341 CSRNP2Q9H175 543 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 PPP2R2CQ9Y2T4 447 aa16.71■□□□□ 0.27
SCARB2-221ENST00000640341 MTF1Q14872 753 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-221ENST00000640341 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-221ENST00000640341 FANCGO15287 622 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-221ENST00000640341 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 WDR24Q96S15 920 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 KRT23Q9C075 422 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
SCARB2-221ENST00000640341 ZNF654Q8IZM8 581 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 WASF1Q92558 559 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 IFNAR1P17181 557 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 ZNF174Q15697 407 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 SGMS1Q86VZ5 419 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-221ENST00000640341 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
SCARB2-221ENST00000640341 KCPQ6ZWJ8 1503 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 NWD2Q9ULI1 1742 aa16.69■□□□□ 0.26
SCARB2-221ENST00000640341 CASQ1P31415 396 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 GYG1P46976 350 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 ZSCAN12O43309 604 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
SCARB2-221ENST00000640341 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 ALS2Q96Q42 1657 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
SCARB2-221ENST00000640341 TEX33O43247 280 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 LIFRP42702 1097 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 TICAM2Q86XR7 235 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 L2HGDHQ9H9P8 463 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-221ENST00000640341 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
SCARB2-221ENST00000640341 TNKSO95271 1327 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 RILPL1Q5EBL4 403 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 REXO1L1PQ8IX06 675 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 ABCC6O95255 1503 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 CCP110O43303 1012 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 TRIM65Q6PJ69 517 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 SOWAHDA6NJG2 315 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 DEXIO95424 95 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 CCT6AP40227 531 aaKnown RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 EARS2Q5JPH6 523 aaKnown RBP16.67■□□□□ 0.26
SCARB2-221ENST00000640341 ADGRA1Q86SQ6 560 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 BLZF1Q9H2G9 400 aa16.67■□□□□ 0.26
SCARB2-221ENST00000640341 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 PTPREP23469 700 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 PPARAQ07869 468 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 ATRIPQ8WXE1 791 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 ARGLU1Q9NWB6 273 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-221ENST00000640341 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms