RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	NME8	Q8N427	588 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ASIC3	Q9UHC3	531 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PHF8	Q9UPP1	1060 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	MICAL1	Q8TDZ2	1067 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	STMN4	Q9H169	189 aa	Predicted RBP	18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	VPS37B	Q9H9H4	285 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CCDC171	Q6TFL3	1326 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	GCNT3	O95395	438 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PHLDB2	Q86SQ0	1253 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CAPN9	O14815	690 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NMI	Q13287	307 aa	Predicted RBP	18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ESR2	Q92731	530 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	OPA1	O60313	960 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ADCY1	Q08828	1119 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NSMF	Q6X4W1	530 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KRBA2	Q6ZNG9	492 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ARHGAP27	Q6ZUM4	889 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TRPC6	Q9Y210	931 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	LACTB	P83111	547 aa	Predicted RBP	18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HACD3	Q9P035	362 aa		18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TPX2	Q9ULW0	747 aa	Known RBP	18.21	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NR1H4	Q96RI1	486 aa	Predicted RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	DZIP3	Q86Y13	1208 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	EHBP1	Q8NDI1	1231 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	OPHN1	O60890	802 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RUFY3	Q7L099	469 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MEIS3	Q99687	375 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MTRF1L	Q9UGC7	380 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MGEA5	O60502	916 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PARP1	P09874	1014 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NOP14	P78316	857 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	DTHD1	Q6ZMT9	781 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MYCT1	Q8N699	235 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TTC14	Q96N46	770 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	UFL1	O94874	794 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LLGL1	Q15334	1064 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	FAM102B	Q5T8I3	360 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ANKRD13D	Q6ZTN6	518 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LDHB	P07195	334 aa	Known RBP	18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	VCX3B	Q9H321	246 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SLC52A1	Q9NWF4	448 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	BCS1L	Q9Y276	419 aa		18.2	■□□□□ 0.5
CACNA1A-238	ENST00000637276	XAGE3	Q8WTP9	111 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	KIFAP3	Q92845	792 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	KRT23	Q9C075	422 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	POLR3E	Q9NVU0	708 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RTCB	Q9Y3I0	505 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PRIM1	P49642	420 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GBP6	Q6ZN66	633 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LMBR1	Q8WVP7	490 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CTAGE1	Q96RT6	745 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MAP7	Q14244	749 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NOC4L	Q9BVI4	516 aa	Known RBP	18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ATAD2	Q6PL18	1390 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CFB	P00751	764 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CPA1	P15085	419 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	HHAT	Q5VTY9	493 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	COPS6	Q7L5N1	327 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PPFIBP2	Q8ND30	876 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	KIAA1107	Q9UPP5	1409 aa		18.19	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TNNI1	P19237	187 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TCIRG1	Q13488	830 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	UTP11	Q9Y3A2	253 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PIK3AP1	Q6ZUJ8	805 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276		B4DLN1	442 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NPR1	P16066	1061 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MRPL12	P52815	198 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MTUS1	Q9ULD2	1270 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CD2AP	Q9Y5K6	639 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	KRT15	P19012	456 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ALDH1L2	Q3SY69	923 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TTC19	Q6DKK2	380 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	STAM	Q92783	540 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TESPA1	A2RU30	521 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NVL	O15381	856 aa	Known RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ASIC2	Q16515	512 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TMEM259	Q4ZIN3	620 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	COBL	O75128	1261 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	XPA	P23025	273 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RINL	Q6ZS11	566 aa		18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.18	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ERCC6L	Q2NKX8	1250 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ZNF365	Q70YC5	407 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MAP10	Q9P2G4	905 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	G3BP2	Q9UN86	482 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MRPS27	Q92552	414 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	AZI2	Q9H6S1	392 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CCDC62	Q6P9F0	684 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LRRC59	Q96AG4	307 aa	Known RBP	18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SUGT1	Q9Y2Z0	365 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GLG1	Q92896	1179 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	FAM8A1	Q9UBU6	413 aa		18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PRG4	Q92954	1404 aa	Predicted RBP	18.17	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PHEX	P78562	749 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	COG7	P83436	770 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LMBR1L	Q6UX01	489 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms