RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 DYNC1LI2O43237 492 aaPredicted RBP5.76□□□□□ -1.49
SRP54-214ENST00000630962 CTSHP09668 335 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 MFAP1P55081 439 aaKnown RBP5.76□□□□□ -1.49
SRP54-214ENST00000630962 ETF1P62495 437 aaKnown RBP5.76□□□□□ -1.49
SRP54-214ENST00000630962 RPL6Q02878 288 aaKnown RBP5.76□□□□□ -1.49
SRP54-214ENST00000630962 WIPI1Q5MNZ9 446 aaPredicted RBP5.76□□□□□ -1.49
SRP54-214ENST00000630962 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 GAL3ST3Q96A11 431 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 PLPPR2Q96GM1 343 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 PSMG3-AS1Q96PY0 264 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 DUSP23Q9BVJ7 150 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 PRDM10Q9NQV6 1147 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 ADAM30Q9UKF2 790 aa5.76□□□□□ -1.49
SRP54-214ENST00000630962 PRAMEF27A3QJZ7 478 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 CYP7A1P22680 504 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 CDK5R2Q13319 367 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 MAP3K11Q16584 847 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 RASIP1Q5U651 963 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 LRFN4Q6PJG9 635 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 PHC3Q8NDX5 983 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 FAM161BQ96MY7 647 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 TMEM74Q96NL1 305 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 FOXQ1Q9C009 403 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 LGR6Q9HBX8 967 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 LRRC4CQ9HCJ2 640 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 SNX11Q9Y5W9 270 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 CSADQ9Y600 493 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 ROBO2Q9HCK4 1378 aa5.75□□□□□ -1.49
SRP54-214ENST00000630962 TMEM265A0A087WTH1 108 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 MED26O95402 600 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 TFE3P19532 575 aaPredicted RBP5.74□□□□□ -1.49
SRP54-214ENST00000630962 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
SRP54-214ENST00000630962 GP2P55259 537 aaKnown RBP5.74□□□□□ -1.49
SRP54-214ENST00000630962 MRPL58Q14197 206 aaKnown RBP5.74□□□□□ -1.49
SRP54-214ENST00000630962 INPP5AQ14642 412 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 IFI16Q16666 785 aaKnown RBP5.74□□□□□ -1.49
SRP54-214ENST00000630962 SLC6A19Q695T7 634 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 HS2ST1Q7LGA3 356 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 TOP6BLQ8N6T0 577 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 GATAD2BQ8WXI9 593 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 RNF19AQ9NV58 838 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 VAV3Q9UKW4 847 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 MAPK8IP1Q9UQF2 711 aa5.74□□□□□ -1.49
SRP54-214ENST00000630962 GNAT3A8MTJ3 354 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 GFRA2O00451 464 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 HOXA10P31260 410 aaPredicted RBP5.73□□□□□ -1.49
SRP54-214ENST00000630962 NTF4P34130 210 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 CAMK2GQ13555 558 aaPredicted RBP5.73□□□□□ -1.49
SRP54-214ENST00000630962 MLECQ14165 292 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 ARMCX6Q7L4S7 300 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 PRDM5Q9NQX1 630 aaPredicted RBP5.73□□□□□ -1.49
SRP54-214ENST00000630962 CCDC39Q9UFE4 941 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 ZC3H7BQ9UGR2 993 aaKnown RBP5.73□□□□□ -1.49
SRP54-214ENST00000630962 SLC5A6Q9Y289 635 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 PCDHB5Q9Y5E4 795 aa5.73□□□□□ -1.49
SRP54-214ENST00000630962 RBM47A0AV96 593 aaKnown RBP5.72□□□□□ -1.49
SRP54-214ENST00000630962 CST3P01034 146 aaPredicted RBP5.72□□□□□ -1.49
SRP54-214ENST00000630962 GRK4P32298 578 aa5.72□□□□□ -1.49
SRP54-214ENST00000630962 IRAK1P51617 712 aa5.72□□□□□ -1.49
SRP54-214ENST00000630962 PTPN11Q06124 597 aaPredicted RBP5.72□□□□□ -1.49
SRP54-214ENST00000630962 SEPT6Q14141 434 aa5.72□□□□□ -1.49
SRP54-214ENST00000630962 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
SRP54-214ENST00000630962 MRPL41Q8IXM3 137 aaKnown RBP5.72□□□□□ -1.49
SRP54-214ENST00000630962 JARID2Q92833 1246 aaPredicted RBP5.72□□□□□ -1.49
SRP54-214ENST00000630962 CILPO75339 1184 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 PGRP06401 933 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 CEACAM5P06731 702 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 ZNF16P17020 682 aaPredicted RBP5.71□□□□□ -1.5
SRP54-214ENST00000630962 YARSP54577 528 aaKnown RBP5.71□□□□□ -1.5
SRP54-214ENST00000630962 TAGLNQ01995 201 aaKnown RBP5.71□□□□□ -1.5
SRP54-214ENST00000630962 PRKCQQ04759 706 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 MPP2Q14168 576 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 SNAP47Q5SQN1 464 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 ASB11Q8WXH4 323 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 HRASLS5Q96KN8 279 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 RHOVQ96L33 236 aa5.71□□□□□ -1.5
SRP54-214ENST00000630962 METTL5Q9NRN9 209 aaKnown RBP5.71□□□□□ -1.5
SRP54-214ENST00000630962 SUPT16HQ9Y5B9 1047 aaKnown RBP5.71□□□□□ -1.5
SRP54-214ENST00000630962 PF4P02776 101 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 ETV3P41162 512 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 KIR3DL1P43629 444 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 CLCN7P51798 805 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 OXCT1P55809 520 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 SLBPQ14493 270 aaKnown RBP eCLIP5.7□□□□□ -1.5
SRP54-214ENST00000630962 CWF19L2Q2TBE0 894 aaKnown RBP5.7□□□□□ -1.5
SRP54-214ENST00000630962 SFRP5Q5T4F7 317 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.7□□□□□ -1.5
SRP54-214ENST00000630962 ERMP1Q7Z2K6 904 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
SRP54-214ENST00000630962 TP53INP2Q8IXH6 220 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 SHISA5Q8N114 240 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 FLCNQ8NFG4 579 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 TPX2Q9ULW0 747 aaKnown RBP5.7□□□□□ -1.5
SRP54-214ENST00000630962 TLR6Q9Y2C9 796 aa5.7□□□□□ -1.5
SRP54-214ENST00000630962 FAM221AA4D161 298 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 LEFTY1O75610 366 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 VAMP1P23763 118 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 TMEM201Q5SNT2 666 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 LETMD1Q6P1Q0 360 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms