RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IFIT1BQ5T764 474 aaKnown RBP19.01■□□□□ 0.63
LDB3-208ENST00000623007 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
LDB3-208ENST00000623007 ZNF654Q8IZM8 581 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 CNKSR1Q969H4 720 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 RBM27Q9P2N5 1060 aaKnown RBP19.01■□□□□ 0.63
LDB3-208ENST00000623007 DEXIO95424 95 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 NASPP49321 788 aaPredicted RBP19.01■□□□□ 0.63
LDB3-208ENST00000623007 SAFBQ15424 915 aaKnown RBP eCLIP19.01■□□□□ 0.63
LDB3-208ENST00000623007 NTRK3Q16288 839 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 MFSD14BQ5SR56 506 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 FANCBQ8NB91 859 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 CHAMP1Q96JM3 812 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 MAP3K14Q99558 947 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 ALG1Q9BT22 464 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 TSPY26PQ9H489 355 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 MCM9Q9NXL9 1143 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 GAKO14976 1311 aa19■□□□□ 0.63
LDB3-208ENST00000623007 SYCE3A1L190 88 aa19■□□□□ 0.63
LDB3-208ENST00000623007 RANBP6O60518 1105 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 YEATS4O95619 227 aa19■□□□□ 0.63
LDB3-208ENST00000623007 ADD1P35611 737 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 FKBP1AP62942 108 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 SF3B2Q13435 895 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 C12orf60Q5U649 245 aa19■□□□□ 0.63
LDB3-208ENST00000623007 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
LDB3-208ENST00000623007 RNF26Q9BY78 433 aaPredicted RBP19■□□□□ 0.63
LDB3-208ENST00000623007 POLR3EQ9NVU0 708 aa19■□□□□ 0.63
LDB3-208ENST00000623007 RTEL1Q9NZ71 1219 aa19■□□□□ 0.63
LDB3-208ENST00000623007 MKRN1Q9UHC7 482 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 BAZ2AQ9UIF9 1905 aaKnown RBP19■□□□□ 0.63
LDB3-208ENST00000623007 MYH2Q9UKX2 1941 aa19■□□□□ 0.63
LDB3-208ENST00000623007 AKAP17AQ02040 695 aaKnown RBP18.99■□□□□ 0.63
LDB3-208ENST00000623007 PODNQ7Z5L7 613 aa18.99■□□□□ 0.63
LDB3-208ENST00000623007 GAS2L3Q86XJ1 694 aa18.99■□□□□ 0.63
LDB3-208ENST00000623007 RTFDC1Q9BY42 306 aaPredicted RBP18.99■□□□□ 0.63
LDB3-208ENST00000623007 G3V3G9 751 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 DCAF8Q5TAQ9 597 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 CAMKK2Q96RR4 588 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 CTAGE5O15320 804 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 CDC27P30260 824 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 KIF5BP33176 963 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 GNL2Q13823 731 aaKnown RBP18.98■□□□□ 0.63
LDB3-208ENST00000623007 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
LDB3-208ENST00000623007 JMYQ8N9B5 988 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 SUPT20HQ8NEM7 779 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 TCP11L1Q9NUJ3 509 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 NAV1Q8NEY1 1877 aa18.98■□□□□ 0.63
LDB3-208ENST00000623007 TSPY2A6NKD2 308 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 BTDP43251 543 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 BAG6P46379 1132 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 CCDC173Q0VFZ6 552 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 UVSSAQ2YD98 709 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 ANKS1AQ92625 1134 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 FAM217BQ9NTX9 383 aaPredicted RBP18.97■□□□□ 0.63
LDB3-208ENST00000623007 TFIP11Q9UBB9 837 aaKnown RBP18.97■□□□□ 0.63
LDB3-208ENST00000623007 TACC3Q9Y6A5 838 aa18.97■□□□□ 0.63
LDB3-208ENST00000623007 CAVIN2O95810 425 aa18.96■□□□□ 0.63
LDB3-208ENST00000623007 KIF23Q02241 960 aaPredicted RBP18.96■□□□□ 0.63
LDB3-208ENST00000623007 FAM177A1Q8N128 213 aaPredicted RBP18.96■□□□□ 0.63
LDB3-208ENST00000623007 CRACR2BQ8N4Y2 399 aaPredicted RBP18.96■□□□□ 0.63
LDB3-208ENST00000623007 CTCFLQ8NI51 663 aaPredicted RBP18.96■□□□□ 0.63
LDB3-208ENST00000623007 BICD2Q8TD16 824 aa18.96■□□□□ 0.63
LDB3-208ENST00000623007 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
LDB3-208ENST00000623007 INCENPQ9NQS7 918 aa18.96■□□□□ 0.63
LDB3-208ENST00000623007 COL11A2P13942 1736 aaPredicted RBP18.96■□□□□ 0.63
LDB3-208ENST00000623007 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
LDB3-208ENST00000623007 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 KRT40Q6A162 431 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
LDB3-208ENST00000623007 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 SLC26A6Q9BXS9 759 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 A0A1W2PQ27 194 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 A0A1W2PQ64 194 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 A0A1W2PQD8 194 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.62
LDB3-208ENST00000623007 GNAQP50148 359 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 FAM173BQ6P4H8 233 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 CCDC73Q6ZRK6 1079 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 TEX11Q8IYF3 940 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
LDB3-208ENST00000623007 ZKSCAN3Q9BRR0 538 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 MKNK2Q9HBH9 465 aa18.95■□□□□ 0.62
LDB3-208ENST00000623007 CCDC192P0DO97 292 aa18.94■□□□□ 0.62
LDB3-208ENST00000623007 MAP3K11Q16584 847 aa18.94■□□□□ 0.62
LDB3-208ENST00000623007 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
LDB3-208ENST00000623007 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
LDB3-208ENST00000623007 ZNF622Q969S3 477 aaKnown RBP eCLIP18.94■□□□□ 0.62
LDB3-208ENST00000623007 FOXP1Q9H334 677 aaPredicted RBP18.94■□□□□ 0.62
LDB3-208ENST00000623007 PRPF3O43395 683 aaKnown RBP18.93■□□□□ 0.62
LDB3-208ENST00000623007 GTF2IP78347 998 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
LDB3-208ENST00000623007 STK38Q15208 465 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 SF3A1Q15459 793 aaKnown RBP18.93■□□□□ 0.62
LDB3-208ENST00000623007 DIXDC1Q155Q3 683 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 PPP4R3BQ5MIZ7 849 aa18.93■□□□□ 0.62
LDB3-208ENST00000623007 ADALQ6DHV7 355 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms