RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SAP30BPQ9UHR5 308 aaKnown RBP25.11■■□□□ 1.61
SPAST-204ENST00000621856 TNKSO95271 1327 aa25.11■■□□□ 1.61
SPAST-204ENST00000621856 PPIP5K2O43314 1243 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 KCNA3P22001 575 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 FOSBP53539 338 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 RHBDL3P58872 404 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 STRIP1Q5VSL9 837 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 CPLX2Q6PUV4 134 aaKnown RBP25.1■■□□□ 1.61
SPAST-204ENST00000621856 IQCA1Q86XH1 822 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 RTKN2Q8IZC4 609 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 MYL10Q9BUA6 226 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 KCNQ5Q9NR82 932 aa25.1■■□□□ 1.61
SPAST-204ENST00000621856 TCHHQ07283 1943 aa25.09■■□□□ 1.61
SPAST-204ENST00000621856 SCN9AQ15858 1988 aa25.09■■□□□ 1.61
SPAST-204ENST00000621856 SCNN1DP51172 638 aa25.09■■□□□ 1.61
SPAST-204ENST00000621856 FERMT3Q86UX7 667 aa25.09■■□□□ 1.61
SPAST-204ENST00000621856 CCDC144CPQ8IYA2 1237 aa25.09■■□□□ 1.61
SPAST-204ENST00000621856 ZSCAN10Q96SZ4 725 aaPredicted RBP25.09■■□□□ 1.61
SPAST-204ENST00000621856 DDX49Q9Y6V7 483 aaKnown RBP25.09■■□□□ 1.61
SPAST-204ENST00000621856 FKBP1AP62942 108 aaKnown RBP25.09■■□□□ 1.61
SPAST-204ENST00000621856 R3HDM1Q15032 1099 aaKnown RBP25.09■■□□□ 1.61
SPAST-204ENST00000621856 FOCADQ5VW36 1801 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 MYH1P12882 1939 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 USP17L3A6NCW0 530 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 USP17L4A6NCW7 530 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 CDKL5O76039 1030 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 GSE1Q14687 1217 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 SEC23AQ15436 765 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 USP17L1Q7RTZ2 530 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 TEKT1Q969V4 418 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 ORC3Q9UBD5 711 aaPredicted RBP25.08■■□□□ 1.61
SPAST-204ENST00000621856 FLT1P17948 1338 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 ROBO3Q96MS0 1386 aa25.08■■□□□ 1.61
SPAST-204ENST00000621856 NCLP19338 710 aaKnown RBP25.07■■□□□ 1.6
SPAST-204ENST00000621856 ADD1P35611 737 aaKnown RBP25.07■■□□□ 1.6
SPAST-204ENST00000621856 DDX60LQ5H9U9 1706 aaKnown RBP25.07■■□□□ 1.6
SPAST-204ENST00000621856 ADAMTSL1Q8N6G6 1762 aa25.07■■□□□ 1.6
SPAST-204ENST00000621856 CDC27P30260 824 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 TGFB2P61812 414 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 DACT2Q5SW24 774 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 HHIPL2Q6UWX4 724 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 DYNLL2Q96FJ2 89 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 GZF1Q9H116 711 aaPredicted RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 CNPY2Q9Y2B0 182 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 ZNF646O15015 1829 aaPredicted RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 TSPY2A6NKD2 308 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 FDPSP14324 419 aaKnown RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 FAM47AQ5JRC9 791 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 IFIT1BQ5T764 474 aaKnown RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 ILDR1Q86SU0 546 aaPredicted RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 ZNF654Q8IZM8 581 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 ENAHQ8N8S7 591 aaPredicted RBP25.06■■□□□ 1.6
SPAST-204ENST00000621856 MKNK2Q9HBH9 465 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 GDPD2Q9HCC8 539 aa25.06■■□□□ 1.6
SPAST-204ENST00000621856 RTN1Q16799 776 aa25.05■■□□□ 1.6
SPAST-204ENST00000621856 KIAA0825Q8IV33 1275 aa25.05■■□□□ 1.6
SPAST-204ENST00000621856 PSMD1Q99460 953 aa25.05■■□□□ 1.6
SPAST-204ENST00000621856 PIM2Q9P1W9 311 aa25.05■■□□□ 1.6
SPAST-204ENST00000621856 NID2Q14112 1375 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 CRKP46108 304 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 NT5C2P49902 561 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 PLCD1P51178 756 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 DNM1Q05193 864 aaKnown RBP25.04■■□□□ 1.6
SPAST-204ENST00000621856 KLHL40Q2TBA0 621 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 NUP133Q8WUM0 1156 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 USP40Q9NVE5 1235 aa25.04■■□□□ 1.6
SPAST-204ENST00000621856 RCAN1P53805 252 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 SOGA3Q5TF21 947 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 USP48Q86UV5 1035 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 RESTQ13127 1097 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 PICALMQ13492 652 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 CSPP1Q1MSJ5 1256 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 CATIPQ7Z7H3 387 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 ZNF287Q9HBT7 754 aa25.03■■□□□ 1.6
SPAST-204ENST00000621856 FAM217BQ9NTX9 383 aaPredicted RBP25.03■■□□□ 1.6
SPAST-204ENST00000621856 FIBPO43427 364 aa25.02■■□□□ 1.6
SPAST-204ENST00000621856 IARSP41252 1262 aaKnown RBP25.02■■□□□ 1.6
SPAST-204ENST00000621856 TFAP4Q01664 338 aa25.02■■□□□ 1.6
SPAST-204ENST00000621856 GUCY1B3Q02153 619 aa25.02■■□□□ 1.6
SPAST-204ENST00000621856 C8orf76Q96K31 380 aa25.02■■□□□ 1.6
SPAST-204ENST00000621856 ZSCAN16Q9H4T2 348 aaPredicted RBP25.02■■□□□ 1.6
SPAST-204ENST00000621856 PPP1R1BQ9UD71 204 aaPredicted RBP25.02■■□□□ 1.6
SPAST-204ENST00000621856 ECM29Q5VYK3 1845 aa25.01■■□□□ 1.59
SPAST-204ENST00000621856 CCDC196A0A1B0GTZ2 297 aa25.01■■□□□ 1.59
SPAST-204ENST00000621856 ZNF444Q8N0Y2 327 aaPredicted RBP25.01■■□□□ 1.59
SPAST-204ENST00000621856 LARGE2Q8N3Y3 721 aa25.01■■□□□ 1.59
SPAST-204ENST00000621856 TMEM87AQ8NBN3 555 aa25.01■■□□□ 1.59
SPAST-204ENST00000621856 UPF1Q92900 1129 aaKnown RBP eCLIP25.01■■□□□ 1.59
SPAST-204ENST00000621856 RBM5P52756 815 aaKnown RBP eCLIP25■■□□□ 1.59
SPAST-204ENST00000621856 KRT85P78386 507 aa25■■□□□ 1.59
SPAST-204ENST00000621856 CDC42EP5Q6NZY7 148 aa25■■□□□ 1.59
SPAST-204ENST00000621856 KLHL34Q8N239 644 aa25■■□□□ 1.59
SPAST-204ENST00000621856 SLC44A5Q8NCS7 719 aa25■■□□□ 1.59
SPAST-204ENST00000621856 PHKBQ93100 1093 aa25■■□□□ 1.59
SPAST-204ENST00000621856 ZDHHC15Q96MV8 337 aa25■■□□□ 1.59
SPAST-204ENST00000621856 ZNF277Q9NRM2 450 aaPredicted RBP25■■□□□ 1.59
SPAST-204ENST00000621856 PSME4Q14997 1843 aa25■■□□□ 1.59
SPAST-204ENST00000621856 YDJCA8MPS7 323 aa25■■□□□ 1.59
SPAST-204ENST00000621856 NMT2O60551 498 aa25■■□□□ 1.59
SPAST-204ENST00000621856 HDLBPQ00341 1268 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms