RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PHIPQ8WWQ0 1821 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 CDK5RAP2Q96SN8 1893 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 A0A0G2JLL6 359 aaPredicted RBP20.93■□□□□ 0.94
HMGN3-203ENST00000620514 IGSF3O75054 1194 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 ECM2O94769 699 aaPredicted RBP20.93■□□□□ 0.94
HMGN3-203ENST00000620514 C17orf99Q6UX52 265 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 PRRT2Q7Z6L0 340 aaPredicted RBP20.93■□□□□ 0.94
HMGN3-203ENST00000620514 MAGEB6Q8N7X4 407 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 MIGA1Q8NAN2 632 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 ADGRA2Q96PE1 1338 aa20.93■□□□□ 0.94
HMGN3-203ENST00000620514 SIPA1L1O43166 1804 aa20.92■□□□□ 0.94
HMGN3-203ENST00000620514 TRIM75PA6NK02 468 aa20.92■□□□□ 0.94
HMGN3-203ENST00000620514 RAB11FIP3O75154 756 aa20.92■□□□□ 0.94
HMGN3-203ENST00000620514 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
HMGN3-203ENST00000620514 GADL1Q6ZQY3 521 aa20.92■□□□□ 0.94
HMGN3-203ENST00000620514 PI4KBQ9UBF8 816 aa20.92■□□□□ 0.94
HMGN3-203ENST00000620514 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
HMGN3-203ENST00000620514 CYP2C8P10632 490 aa20.91■□□□□ 0.94
HMGN3-203ENST00000620514 DHX36Q9H2U1 1008 aaKnown RBP20.91■□□□□ 0.94
HMGN3-203ENST00000620514 SAP30BPQ9UHR5 308 aaKnown RBP20.91■□□□□ 0.94
HMGN3-203ENST00000620514 PALD1Q9ULE6 856 aa20.91■□□□□ 0.94
HMGN3-203ENST00000620514 FOCADQ5VW36 1801 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 CAP2P40123 477 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 SLC4A8Q2Y0W8 1093 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 FASTKD5Q7L8L6 764 aaKnown RBP20.9■□□□□ 0.94
HMGN3-203ENST00000620514 DNAJC18Q9H819 358 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 HERC5Q9UII4 1024 aaKnown RBP20.9■□□□□ 0.94
HMGN3-203ENST00000620514 PTCH2Q9Y6C5 1203 aa20.9■□□□□ 0.94
HMGN3-203ENST00000620514 PTPRFP10586 1907 aa20.89■□□□□ 0.93
HMGN3-203ENST00000620514 CTGFP29279 349 aa20.89■□□□□ 0.93
HMGN3-203ENST00000620514 ARHGEF6Q15052 776 aa20.89■□□□□ 0.93
HMGN3-203ENST00000620514 PARK7Q99497 189 aaKnown RBP20.89■□□□□ 0.93
HMGN3-203ENST00000620514 DNAJC2Q99543 621 aaKnown RBP20.89■□□□□ 0.93
HMGN3-203ENST00000620514 HTTP42858 3142 aa20.88■□□□□ 0.93
HMGN3-203ENST00000620514 JAG1P78504 1218 aa20.88■□□□□ 0.93
HMGN3-203ENST00000620514 KIF22Q14807 665 aa20.88■□□□□ 0.93
HMGN3-203ENST00000620514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
HMGN3-203ENST00000620514 EDC3Q96F86 508 aaKnown RBP20.88■□□□□ 0.93
HMGN3-203ENST00000620514 ATAD5Q96QE3 1844 aa20.88■□□□□ 0.93
HMGN3-203ENST00000620514 GOLIM4O00461 696 aa20.87■□□□□ 0.93
HMGN3-203ENST00000620514 SPP2Q13103 211 aa20.87■□□□□ 0.93
HMGN3-203ENST00000620514 TTF1Q15361 905 aaPredicted RBP20.87■□□□□ 0.93
HMGN3-203ENST00000620514 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
HMGN3-203ENST00000620514 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
HMGN3-203ENST00000620514 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
HMGN3-203ENST00000620514 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
HMGN3-203ENST00000620514 BCRP11274 1271 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 PDE6AP16499 860 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 PSMC4P43686 418 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 USP5P45974 858 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 TREML2Q5T2D2 321 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
HMGN3-203ENST00000620514 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
HMGN3-203ENST00000620514 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
HMGN3-203ENST00000620514 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
HMGN3-203ENST00000620514 USP17L5A8MUK1 530 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 SLC9C2Q5TAH2 1124 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 TRIM47Q96LD4 638 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 BOLA2Q9H3K6 86 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 AGTPBP1Q9UPW5 1226 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 SLC45A1Q9Y2W3 748 aa20.85■□□□□ 0.93
HMGN3-203ENST00000620514 POTEFA5A3E0 1075 aa20.84■□□□□ 0.93
HMGN3-203ENST00000620514 GDF11O95390 407 aa20.84■□□□□ 0.93
HMGN3-203ENST00000620514 HMGCS2P54868 508 aa20.84■□□□□ 0.93
HMGN3-203ENST00000620514 TMED8Q6PL24 325 aaPredicted RBP20.84■□□□□ 0.93
HMGN3-203ENST00000620514 LRRCC1Q9C099 1032 aa20.84■□□□□ 0.93
HMGN3-203ENST00000620514 MYH1P12882 1939 aa20.84■□□□□ 0.93
HMGN3-203ENST00000620514 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 MAGEB6P1A0A0J9YX57 407 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 ATP5JP18859 108 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 SLFNL1Q499Z3 407 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 SLC9C1Q4G0N8 1177 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 CERS3Q8IU89 383 aa20.83■□□□□ 0.93
HMGN3-203ENST00000620514 PROCA1Q8NCQ7 364 aaPredicted RBP20.83■□□□□ 0.93
HMGN3-203ENST00000620514 TCRBV5S4A2TA0A5A2 114 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
HMGN3-203ENST00000620514 GNRH1P01148 92 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 OSBPP22059 807 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 SH3TC2Q8TF17 1288 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 ZNF333Q96JL9 665 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 TBC1D2Q9BYX2 928 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 AS3MTQ9HBK9 375 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 PAG1Q9NWQ8 432 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 LOC285556D6RIA3 1793 aa20.82■□□□□ 0.92
HMGN3-203ENST00000620514 ASNSP08243 561 aa20.81■□□□□ 0.92
HMGN3-203ENST00000620514 SMCR8Q8TEV9 937 aaPredicted RBP20.81■□□□□ 0.92
HMGN3-203ENST00000620514 WDR18Q9BV38 432 aa20.81■□□□□ 0.92
HMGN3-203ENST00000620514 SRRDQ9UH36 339 aa20.81■□□□□ 0.92
HMGN3-203ENST00000620514 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
HMGN3-203ENST00000620514 TNRC18O15417 2968 aaPredicted RBP20.8■□□□□ 0.92
HMGN3-203ENST00000620514 MYCP01106 439 aaPredicted RBP20.8■□□□□ 0.92
HMGN3-203ENST00000620514 CHGBP05060 677 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 PLCD1P51178 756 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 PRMT2P55345 433 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 MTMR2Q13614 643 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 SH3D19Q5HYK7 790 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 LCORLQ8N3X6 602 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms