RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 USP5P45974 858 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 SLC44A5Q8NCS7 719 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 MARCKSP29966 332 aaPredicted RBP15.2■□□□□ 0.02
TMCO3-210ENST00000620021 GNL2Q13823 731 aaKnown RBP15.2■□□□□ 0.02
TMCO3-210ENST00000620021 RTN1Q16799 776 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
TMCO3-210ENST00000620021 CCAR1Q8IX12 1150 aaKnown RBP15.2■□□□□ 0.02
TMCO3-210ENST00000620021 KIF23Q02241 960 aaPredicted RBP15.19■□□□□ 0.02
TMCO3-210ENST00000620021 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
TMCO3-210ENST00000620021 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
TMCO3-210ENST00000620021 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
TMCO3-210ENST00000620021 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
TMCO3-210ENST00000620021 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 RCOR1Q9UKL0 485 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 GTF2IP78347 998 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 SSRP1Q08945 709 aaKnown RBP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 MYSM1Q5VVJ2 828 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 FANCBQ8NB91 859 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 ZNF622Q969S3 477 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 RXRBP28702 533 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 SEC23AQ15436 765 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 WDR66Q8TBY9 1149 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 ZNF396Q96N95 335 aaPredicted RBP15.18■□□□□ 0.02
TMCO3-210ENST00000620021 CHD4Q14839 1912 aa15.18■□□□□ 0.02
TMCO3-210ENST00000620021 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 STK38Q15208 465 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
TMCO3-210ENST00000620021 BTBD18B2RXH4 712 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 PLCD1P51178 756 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 MAP3K11Q16584 847 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
TMCO3-210ENST00000620021 BBOX1O75936 387 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 CDKL5O76039 1030 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 CCDC173Q0VFZ6 552 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
TMCO3-210ENST00000620021 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
TMCO3-210ENST00000620021 TSPY2A6NKD2 308 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
TMCO3-210ENST00000620021 SPTY2D1Q68D10 685 aaPredicted RBP15.16■□□□□ 0.02
TMCO3-210ENST00000620021 FSIP1Q8NA03 581 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 FUCA2Q9BTY2 467 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 PDGFDQ9GZP0 370 aaPredicted RBP15.16■□□□□ 0.02
TMCO3-210ENST00000620021 KCNQ5Q9NR82 932 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 ATP2B4P23634 1241 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 BTDP43251 543 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 EN1Q05925 392 aaPredicted RBP15.16■□□□□ 0.02
TMCO3-210ENST00000620021 NR5A1Q13285 461 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 IQCA1Q86XH1 822 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
TMCO3-210ENST00000620021 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 SRGNP10124 158 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 TRIM29Q14134 588 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
TMCO3-210ENST00000620021 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
TMCO3-210ENST00000620021 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
TMCO3-210ENST00000620021 VEGFAP15692 232 aaPredicted RBP15.14■□□□□ 0.01
TMCO3-210ENST00000620021 IFNAR1P17181 557 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
TMCO3-210ENST00000620021 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 PPP1R9BQ96SB3 815 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 PLSCR1O15162 318 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 FMNL1O95466 1100 aaPredicted RBP15.14■□□□□ 0.01
TMCO3-210ENST00000620021 TFAP4Q01664 338 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 TYRO3Q06418 890 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
TMCO3-210ENST00000620021 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 RASGRP2Q7LDG7 609 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 LUZP1Q86V48 1076 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 SHISA4Q96DD7 197 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 SCNN1DP51172 638 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 TRIM22Q8IYM9 498 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 RTEL1Q9NZ71 1219 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
TMCO3-210ENST00000620021 SPTLC2O15270 562 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 AP5Z1O43299 807 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
TMCO3-210ENST00000620021 CHRNA5P30532 468 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 NDUFA8P51970 172 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 PICALMQ13492 652 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 SNW1Q13573 536 aaKnown RBP15.13■□□□□ 0.01
TMCO3-210ENST00000620021 ANO1Q5XXA6 986 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
TMCO3-210ENST00000620021 CLIC6Q96NY7 704 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms