RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
SREK1-216ENST00000612404 TCP10L2B9ZVM9 353 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 PRC1O43663 620 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 KDM4AO75164 1064 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 MCM2P49736 904 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
SREK1-216ENST00000612404 SPDYE2Q495Y8 402 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 Q6ZUG5 572 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 TTC6Q86TZ1 520 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
SREK1-216ENST00000612404 ZBED3Q96IU2 234 aaPredicted RBP20.72■□□□□ 0.91
SREK1-216ENST00000612404 PCP11498 1178 aaKnown RBP20.72■□□□□ 0.91
SREK1-216ENST00000612404 NKX2-3Q8TAU0 364 aa20.72■□□□□ 0.91
SREK1-216ENST00000612404 KIF4BQ2VIQ3 1234 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 CYB5R4Q7L1T6 521 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 ROBO3Q96MS0 1386 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 RANBP6O60518 1105 aaKnown RBP20.71■□□□□ 0.91
SREK1-216ENST00000612404 NPM3O75607 178 aaKnown RBP20.71■□□□□ 0.91
SREK1-216ENST00000612404 HLA-DOAP06340 250 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 ESR2Q92731 530 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 MKNK2Q9HBH9 465 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 ZSWIM5Q9P217 1185 aa20.71■□□□□ 0.91
SREK1-216ENST00000612404 ENTPD3O75355 529 aa20.7■□□□□ 0.9
SREK1-216ENST00000612404 ANTXR2P58335 489 aa20.7■□□□□ 0.9
SREK1-216ENST00000612404 ALDH8A1Q9H2A2 487 aaPredicted RBP20.7■□□□□ 0.9
SREK1-216ENST00000612404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
SREK1-216ENST00000612404 FGRP09769 529 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
SREK1-216ENST00000612404 EPS15P42566 896 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
SREK1-216ENST00000612404 SLC44A5Q8NCS7 719 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 DHX36Q9H2U1 1008 aaKnown RBP20.69■□□□□ 0.9
SREK1-216ENST00000612404 LIMCH1Q9UPQ0 1083 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 ORC4O43929 436 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 SPRYD3Q8NCJ5 442 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 BRF1Q92994 677 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 ZNF287Q9HBT7 754 aa20.69■□□□□ 0.9
SREK1-216ENST00000612404 DDTLA6NHG4 134 aaPredicted RBP20.68■□□□□ 0.9
SREK1-216ENST00000612404 C16orf86Q6ZW13 317 aa20.68■□□□□ 0.9
SREK1-216ENST00000612404 HSP90AA1P07900 732 aaKnown RBP20.68■□□□□ 0.9
SREK1-216ENST00000612404 TRPM4Q8TD43 1214 aa20.68■□□□□ 0.9
SREK1-216ENST00000612404 TMX3Q96JJ7 454 aa20.68■□□□□ 0.9
SREK1-216ENST00000612404 SERPINB13Q9UIV8 391 aa20.68■□□□□ 0.9
SREK1-216ENST00000612404 WDR19Q8NEZ3 1342 aa20.68■□□□□ 0.9
SREK1-216ENST00000612404 CDK8P49336 464 aa20.67■□□□□ 0.9
SREK1-216ENST00000612404 FKBP1CQ5VVH2 108 aa20.67■□□□□ 0.9
SREK1-216ENST00000612404 SH3BP5LQ7L8J4 393 aa20.67■□□□□ 0.9
SREK1-216ENST00000612404 ZKSCAN3Q9BRR0 538 aa20.67■□□□□ 0.9
SREK1-216ENST00000612404 GPHNQ9NQX3 736 aaPredicted RBP20.67■□□□□ 0.9
SREK1-216ENST00000612404 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
SREK1-216ENST00000612404 FAM47AQ5JRC9 791 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 CRACR2BQ8N4Y2 399 aaPredicted RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 TPCN1Q9ULQ1 816 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 ASTN2O75129 1339 aaPredicted RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 IFIT3O14879 490 aaKnown RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 ZNF444Q8N0Y2 327 aaPredicted RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 TMEM87BQ96K49 555 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 CSRNP1Q96S65 589 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 UBAC1Q9BSL1 405 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 SCAF8Q9UPN6 1271 aaKnown RBP20.66■□□□□ 0.9
SREK1-216ENST00000612404 CNTNAP1P78357 1384 aa20.66■□□□□ 0.9
SREK1-216ENST00000612404 TMEM67Q5HYA8 995 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 TRIM34Q9BYJ4 488 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 NAP1L2Q9ULW6 460 aaPredicted RBP20.65■□□□□ 0.9
SREK1-216ENST00000612404 TNNI2P48788 182 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 FAM83AQ86UY5 434 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 TMEM39BQ9GZU3 492 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 EHD4Q9H223 541 aa20.65■□□□□ 0.9
SREK1-216ENST00000612404 ANGEL1Q9UNK9 670 aaKnown RBP20.65■□□□□ 0.9
SREK1-216ENST00000612404 ATRNL1Q5VV63 1379 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 ERICH2A1L162 156 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 TFAP4Q01664 338 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 GABPAQ06546 454 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 TNFAIP1Q13829 316 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 IQCA1Q86XH1 822 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 ZSCAN31Q96LW9 406 aaPredicted RBP20.64■□□□□ 0.89
SREK1-216ENST00000612404 FOXD4L1Q9NU39 408 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 SWAP70Q9UH65 585 aa20.64■□□□□ 0.89
SREK1-216ENST00000612404 GLTPD2A6NH11 291 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 SH2B2O14492 632 aaPredicted RBP20.63■□□□□ 0.89
SREK1-216ENST00000612404 LARGE1O95461 756 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 TSPY3P0CV98 308 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 TSPY8P0CW00 308 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 RASA1P20936 1047 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 IGDCC4Q8TDY8 1250 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
SREK1-216ENST00000612404 COL2A1P02458 1487 aaPredicted RBP20.63■□□□□ 0.89
SREK1-216ENST00000612404 SLURP2P0DP57 97 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 STK3Q13188 491 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms