RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 IKBKBO14920 756 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 LMOD1P29536 600 aaPredicted RBP19.85■□□□□ 0.77
NEK3-206ENST00000611833 PNOCQ13519 176 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 PDCL2Q8N4E4 241 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 CCDC82Q8N4S0 544 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 SDR42E1Q8WUS8 393 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 RNF41Q9H4P4 317 aaPredicted RBP19.85■□□□□ 0.77
NEK3-206ENST00000611833 ABCF2Q9UG63 623 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 FAM237AA0A1B0GTK4 181 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 BTBD18B2RXH4 712 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 MMP1P03956 469 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 TMTC2Q8N394 836 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 KRI1Q8N9T8 703 aaKnown RBP19.84■□□□□ 0.77
NEK3-206ENST00000611833 CNNM3Q8NE01 707 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 KCNH3Q9ULD8 1083 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 COL1A1P02452 1464 aaPredicted RBP19.84■□□□□ 0.77
NEK3-206ENST00000611833 CCDC196A0A1B0GTZ2 297 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 PPARAQ07869 468 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 DIS3L2Q8IYB7 885 aaKnown RBP19.84■□□□□ 0.77
NEK3-206ENST00000611833 CCAR2Q8N163 923 aaKnown RBP19.84■□□□□ 0.77
NEK3-206ENST00000611833 CCDC150Q8NCX0 1101 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 ANKRD7Q92527 254 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 KCNJ14Q9UNX9 436 aa19.84■□□□□ 0.77
NEK3-206ENST00000611833 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.76
NEK3-206ENST00000611833 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.76
NEK3-206ENST00000611833 OLFM4Q6UX06 510 aa19.83■□□□□ 0.76
NEK3-206ENST00000611833 CLEC4GQ6UXB4 293 aa19.83■□□□□ 0.76
NEK3-206ENST00000611833 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.76
NEK3-206ENST00000611833 ANKRD18AQ8IVF6 992 aa19.83■□□□□ 0.76
NEK3-206ENST00000611833 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.76
NEK3-206ENST00000611833 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.76
NEK3-206ENST00000611833 SMIM22K7EJ46 135 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 SFPQP23246 707 aaKnown RBP eCLIP19.82■□□□□ 0.76
NEK3-206ENST00000611833 FANCCQ00597 558 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 LONRF3Q496Y0 759 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 PPP4R3BQ5MIZ7 849 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 KRBA2Q6ZNG9 492 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 BARGINQ6ZT62 677 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 NYAP1Q6ZVC0 841 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 CMTR1Q8N1G2 835 aaKnown RBP19.82■□□□□ 0.76
NEK3-206ENST00000611833 UBAC1Q9BSL1 405 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 RAI14Q9P0K7 980 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 CASZ1Q86V15 1759 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 MINDY4BA8MYZ0 360 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 NRDCO43847 1150 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 DEXIO95424 95 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 DHX8Q14562 1220 aaKnown RBP19.82■□□□□ 0.76
NEK3-206ENST00000611833 LINC00116Q8NCU8 138 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 MTA3Q9BTC8 594 aa19.82■□□□□ 0.76
NEK3-206ENST00000611833 MAGEB6P1A0A0J9YX57 407 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 MYL5Q02045 173 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 SF3B3Q15393 1217 aaKnown RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 CRACR2BQ8N4Y2 399 aaPredicted RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 CACNA1SQ13698 1873 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 KCNQ4P56696 695 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 UBE4AQ14139 1066 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 SPECC1Q5M775 1068 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 ARMCX5Q6P1M9 558 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 METTL16Q86W50 562 aaKnown RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 FANCBQ8NB91 859 aa19.81■□□□□ 0.76
NEK3-206ENST00000611833 RIOK1Q9BRS2 568 aaKnown RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 FOXP1Q9H334 677 aaPredicted RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 GNL3LQ9NVN8 582 aaKnown RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 HOOK1Q9UJC3 728 aaKnown RBP19.81■□□□□ 0.76
NEK3-206ENST00000611833 SERPINC1P01008 464 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 ATP1A3P13637 1013 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 RILPL1Q5EBL4 403 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 KCND1Q9NSA2 647 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 BSDC1Q9NW68 430 aaPredicted RBP19.8■□□□□ 0.76
NEK3-206ENST00000611833 TOB1P50616 345 aaPredicted RBP19.8■□□□□ 0.76
NEK3-206ENST00000611833 NCBP1Q09161 790 aaKnown RBP19.8■□□□□ 0.76
NEK3-206ENST00000611833 SYCP1Q15431 976 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 ANAPC4Q9UJX5 808 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 MINPP1Q9UNW1 487 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 PCDHA5Q9Y5H7 936 aa19.8■□□□□ 0.76
NEK3-206ENST00000611833 CBFA2T2O43439 604 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 UBASH3AP57075 661 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 ESR2Q92731 530 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 SEC23AQ15436 765 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 BICDL1Q6ZP65 573 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 CELF1Q92879 486 aaKnown RBP19.79■□□□□ 0.76
NEK3-206ENST00000611833 HSD3B7Q9H2F3 369 aa19.79■□□□□ 0.76
NEK3-206ENST00000611833 TNKSO95271 1327 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 SCN7AQ01118 1682 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 RCAN1P53805 252 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 NR5A1Q13285 461 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 FOXP4Q8IVH2 680 aaPredicted RBP19.78■□□□□ 0.76
NEK3-206ENST00000611833 KIF18AQ8NI77 898 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 ZNF384Q8TF68 577 aa19.78■□□□□ 0.76
NEK3-206ENST00000611833 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
NEK3-206ENST00000611833 KIF2AO00139 706 aaPredicted RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 ATP2B1P20020 1258 aa19.77■□□□□ 0.76
NEK3-206ENST00000611833 DYNLL1P63167 89 aaKnown RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 AKAP17AQ02040 695 aaKnown RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 CFAP100Q494V2 611 aa19.77■□□□□ 0.76
NEK3-206ENST00000611833 CAVIN4Q5BKX8 364 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms