RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 MMRN2Q9H8L6 949 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 IQGAP1P46940 1657 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 WDHD1O75717 1129 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 TBC1D9BQ66K14 1250 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 CPXCR1Q8N123 301 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 STAMQ92783 540 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 NARFQ9UHQ1 456 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 BBOX1O75936 387 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 LARGE1O95461 756 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 TRIM21P19474 475 aaKnown RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 TXKP42681 527 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 TTC38Q5R3I4 469 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 SUPT20HQ8NEM7 779 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 ZBTB21Q9ULJ3 1066 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 MAPK8IP1Q9UQF2 711 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 TMEM131LA2VDJ0 1609 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 ELP1O95163 1332 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 BTBD18B2RXH4 712 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 SKILP12757 684 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 USP8P40818 1118 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 NECTIN1Q15223 517 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 UBXN4Q92575 508 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 RGS12O14924 1447 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 CCNT1O60563 726 aaKnown RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 ZNF202O95125 648 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 PPP2R5BQ15173 497 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 USH1GQ495M9 461 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 LRRC27Q9C0I9 530 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 BSDC1Q9NW68 430 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-218ENST00000610726 IFNKQ9P0W0 207 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 MROH2AA6NES4 1674 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 COL15A1P39059 1388 aa8.26□□□□□ -1.09
CSDE1-218ENST00000610726 CEP170BQ9Y4F5 1589 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 KIF5CO60282 957 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 NEMFO60524 1076 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 APOA5Q6Q788 366 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 ACBD3Q9H3P7 528 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 SOS2Q07890 1332 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 FOXO4P98177 505 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 TXLNBQ8N3L3 684 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 NF2P35240 595 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 SSR1P43307 286 aaKnown RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 ATP8A2Q9NTI2 1148 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 MINPP1Q9UNW1 487 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 GRAPQ13588 217 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 TEX35Q5T0J7 233 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 FAM114A1Q8IWE2 563 aa8.25□□□□□ -1.09
CSDE1-218ENST00000610726 GRAPLQ8TC17 118 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-218ENST00000610726 KLRF2D3W0D1 207 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 PRDX5P30044 214 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 NONOQ15233 471 aaKnown RBP eCLIP8.24□□□□□ -1.092e-6■■□□□ 12.7
CSDE1-218ENST00000610726 FBXO18Q8NFZ0 1043 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.091e-7■□□□□ 10.5
CSDE1-218ENST00000610726 CLSTN2Q9H4D0 955 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 SH2D4AQ9H788 454 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 ZNF408Q9H9D4 720 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 ZSWIM5Q9P217 1185 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
CSDE1-218ENST00000610726 FRMPD2Q68DX3 1309 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-218ENST00000610726 KIF2AO00139 706 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-218ENST00000610726 SEMA3EO15041 775 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 CHMP2AO43633 222 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 CUTAO60888 179 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 PTGS1P23219 599 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 HSPA1LP34931 641 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 TNNT3P45378 269 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-218ENST00000610726 SPAG1Q07617 926 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 SCARF1Q14162 830 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 STXBP4Q6ZWJ1 553 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 ZMYM6O95789 1325 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 CLRN2A0PK11 232 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 AKR1B10O60218 316 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 CFBP00751 764 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 CHGBP05060 677 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 MECOMQ03112 1051 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 PDIA6Q15084 440 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 VPS36Q86VN1 386 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 FNBP4Q8N3X1 1017 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-218ENST00000610726 TAF4BQ92750 862 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms