RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SMYD4Q8IYR2 804 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 ZBTB38Q8NAP3 1195 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 MLKLQ8NB16 471 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 GPR108Q9NPR9 543 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 PPP2R2CQ9Y2T4 447 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 KIF28PB7ZC32 967 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 TMEM232C9JQI7 657 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 ERCC3P19447 782 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 FOXO4P98177 505 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 SPA17Q15506 151 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 SARM1Q6SZW1 724 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 HEATR3Q7Z4Q2 680 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 ANKRD18AQ8IVF6 992 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 TAB2Q9NYJ8 693 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 ZSWIM5Q9P217 1185 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
SYNPO2-206ENST00000610556 PATL2C9JE40 543 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 PDE8BO95263 885 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 PCCAP05165 728 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 MCAMP43121 646 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 GABPB1Q06547 395 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 ZNF654Q8IZM8 581 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 TMX4Q9H1E5 349 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 PIH1D3Q9NQM4 214 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 VPS18Q9P253 973 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 TUBB4AP04350 444 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 RFX5P48382 616 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 EXOSC10Q01780 885 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 TBC1D10CQ8IV04 446 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 IQUBQ8NA54 791 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 CTAGE1Q96RT6 745 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 GBP3Q9H0R5 595 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 EPC1Q9H2F5 836 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 MCM9Q9NXL9 1143 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 ERVV-2B6SEH9 535 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 TECPR2O15040 1411 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 WDHD1O75717 1129 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 CIAO1O76071 339 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 GNAT2P19087 354 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 ADD2P35612 726 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 PDE4BQ07343 736 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 CYB5R4Q7L1T6 521 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 SAMSN1Q9NSI8 373 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
SYNPO2-206ENST00000610556 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 SYNRGQ9UMZ2 1314 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 FOXN1O15353 648 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 FDPSP14324 419 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CASP1P29466 404 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 KIF5BP33176 963 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CHMP4BP1P59074 171 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 HLFQ16534 295 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 TDRD12Q587J7 1177 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 FAM47AQ5JRC9 791 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 FKBP15Q5T1M5 1219 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 FANCBQ8NB91 859 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 KCNB2Q92953 911 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 SLF1Q9BQI6 1058 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 TCP11L1Q9NUJ3 509 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 ZBTB1Q9Y2K1 713 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 HEG1Q9ULI3 1381 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CDC27P30260 824 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 KRT9P35527 623 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 ARMCX5Q6P1M9 558 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CACNA2D4Q7Z3S7 1137 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 GDAP1L1Q96MZ0 367 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 SEC31BQ9NQW1 1179 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 KIF20BQ96Q89 1820 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CAPN2P17655 700 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 GYG1P46976 350 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 AEBP2Q6ZN18 517 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 DPF2Q92785 391 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 HINFPQ9BQA5 517 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 CSRNP2Q9H175 543 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 ALDH8A1Q9H2A2 487 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 PCDHB6Q9Y5E3 794 aa7.78□□□□□ -1.16
SYNPO2-206ENST00000610556 TNKSO95271 1327 aa7.77□□□□□ -1.16
SYNPO2-206ENST00000610556 H0YHG0 523 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 SH2B2O14492 632 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 BMP15O95972 392 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 OAS2P29728 719 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CDC25AP30304 524 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 ASIC1P78348 528 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 SPAG1Q07617 926 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 NEK11Q8NG66 645 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 ST7Q9NRC1 585 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 TFCP2L1Q9NZI6 479 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 SEC63Q9UGP8 760 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 USP17L21D6R901 530 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 PSMA7O14818 248 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 AKR1B10O60218 316 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CLCN6P51797 869 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms