RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
HDDC2-206ENST00000608461 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
HDDC2-206ENST00000608461 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 EHD4Q9H223 541 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 MYH1P12882 1939 aa17.21■□□□□ 0.35
HDDC2-206ENST00000608461 GJA5P36382 358 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 APPBP2Q92624 585 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 PALD1Q9ULE6 856 aa17.2■□□□□ 0.34
HDDC2-206ENST00000608461 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
HDDC2-206ENST00000608461 CETPP11597 493 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
HDDC2-206ENST00000608461 SNAPC2Q13487 334 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
HDDC2-206ENST00000608461 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 LCORLQ8N3X6 602 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
HDDC2-206ENST00000608461 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 MS4A4AQ96JQ5 239 aa17.19■□□□□ 0.34
HDDC2-206ENST00000608461 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
HDDC2-206ENST00000608461 CXCL11O14625 94 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 IRF6O14896 467 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 TRPA1O75762 1119 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 MBD4O95243 580 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 GNAT2P19087 354 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 CAP2P40123 477 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 GIMAP6Q6P9H5 292 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
HDDC2-206ENST00000608461 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
HDDC2-206ENST00000608461 SERPINB13Q9UIV8 391 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
HDDC2-206ENST00000608461 PTPRAP18433 802 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 LBX1P52954 281 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
HDDC2-206ENST00000608461 SAP30BPQ9UHR5 308 aaKnown RBP17.17■□□□□ 0.34
HDDC2-206ENST00000608461 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
HDDC2-206ENST00000608461 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
HDDC2-206ENST00000608461 DDX60LQ5H9U9 1706 aaKnown RBP17.16■□□□□ 0.34
HDDC2-206ENST00000608461 POLR3DP05423 398 aaPredicted RBP17.16■□□□□ 0.34
HDDC2-206ENST00000608461 ASNSP08243 561 aa17.16■□□□□ 0.34
HDDC2-206ENST00000608461 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
HDDC2-206ENST00000608461 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
HDDC2-206ENST00000608461 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
HDDC2-206ENST00000608461 CCL15-CCL14A0A0B4J2E2 113 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 CCL15Q16663 113 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 SLC4A4Q9Y6R1 1079 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 ZHX2Q9Y6X8 837 aa17.15■□□□□ 0.34
HDDC2-206ENST00000608461 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDDC2-206ENST00000608461 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 FASTKD5Q7L8L6 764 aaKnown RBP17.14■□□□□ 0.33
HDDC2-206ENST00000608461 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 PTPN18Q99952 460 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 AS3MTQ9HBK9 375 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
HDDC2-206ENST00000608461 ATAD5Q96QE3 1844 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 GPAA1O43292 621 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 CHGBP05060 677 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
HDDC2-206ENST00000608461 PLCD1P51178 756 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 GABPAQ06546 454 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
HDDC2-206ENST00000608461 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
HDDC2-206ENST00000608461 A0A0G2JLL6 359 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-206ENST00000608461 TRIM6-TRIM34B2RNG4 842 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
HDDC2-206ENST00000608461 PRKAB2O43741 272 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 SLURP2P0DP57 97 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 PRRT2Q7Z6L0 340 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-206ENST00000608461 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 PHIPQ8WWQ0 1821 aa17.12■□□□□ 0.33
HDDC2-206ENST00000608461 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
HDDC2-206ENST00000608461 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
HDDC2-206ENST00000608461 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
HDDC2-206ENST00000608461 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
HDDC2-206ENST00000608461 SLC45A1Q9Y2W3 748 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms