RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
LIG1-220ENST00000601091 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 HSP90AA4PQ58FG1 418 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 ARPC5LQ9BPX5 153 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 ST7Q9NRC1 585 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 GNG11P61952 73 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
LIG1-220ENST00000601091 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 KRT222Q8N1A0 295 aa11.8□□□□□ -0.52
LIG1-220ENST00000601091 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
LIG1-220ENST00000601091 CIAO1O76071 339 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 ZRANB2O95218 330 aaKnown RBP eCLIP11.79□□□□□ -0.52
LIG1-220ENST00000601091 NLRP12P59046 1061 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 SYT10Q6XYQ8 523 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 CPLX3Q8WVH0 158 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 ESR2Q92731 530 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 TRIM11Q96F44 468 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 PUS3Q9BZE2 481 aaKnown RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 RTEL1Q9NZ71 1219 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 MAST3O60307 1309 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 GNAT2P19087 354 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 ZNHIT6Q9NWK9 470 aaKnown RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 H7C1W4 665 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 KIF5CO60282 957 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 RDXP35241 583 aaKnown RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 CCDC152Q4G0S7 254 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 KRT40Q6A162 431 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 DNAJC10Q8IXB1 793 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
LIG1-220ENST00000601091 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
LIG1-220ENST00000601091 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
LIG1-220ENST00000601091 CYP7A1P22680 504 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 FANCCQ00597 558 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 PTPN21Q16825 1174 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
LIG1-220ENST00000601091 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
LIG1-220ENST00000601091 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
LIG1-220ENST00000601091 KCNH3Q9ULD8 1083 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 ERLIN1O75477 346 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 MNAT1P51948 309 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 DYTNA2CJ06 578 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 CYP27B1O15528 508 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 NDUFA8P51970 172 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 PHKBQ93100 1093 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
LIG1-220ENST00000601091 DIP2AQ14689 1571 aa11.78□□□□□ -0.52
LIG1-220ENST00000601091 MBD4O95243 580 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 BMP15O95972 392 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.52
LIG1-220ENST00000601091 NLRP5P59047 1200 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 KCNB2Q92953 911 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 SRRTQ9BXP5 876 aaKnown RBP11.77□□□□□ -0.52
LIG1-220ENST00000601091 TRIM75PA6NK02 468 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 G3V3G9 751 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 CUTAO60888 179 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 CMA1P23946 247 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 CDC25BP30305 580 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.52
LIG1-220ENST00000601091 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.52
LIG1-220ENST00000601091 ARMC9Q7Z3E5 817 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.52
LIG1-220ENST00000601091 OSBP2Q969R2 916 aa11.77□□□□□ -0.52
LIG1-220ENST00000601091 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 PCCAP05165 728 aaPredicted RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 PUM3Q15397 648 aaKnown RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 ELF2Q15723 593 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 BICDL1Q6ZP65 573 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 UTP14AQ9BVJ6 771 aaKnown RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 RABL2AQ9UBK7 228 aaPredicted RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 GABBR1Q9UBS5 961 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 CLIC4Q9Y696 253 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 DIP2BQ9P265 1576 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 UTYO14607 1347 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 ZNF532Q9HCE3 1301 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 TRIM66O15016 1216 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 PDE8AO60658 829 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 PFKFB1P16118 471 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 AFMP43652 599 aa11.77□□□□□ -0.53
LIG1-220ENST00000601091 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 ZBTB38Q8NAP3 1195 aaPredicted RBP11.77□□□□□ -0.53
LIG1-220ENST00000601091 ETAA1Q9NY74 926 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms