RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 UPF3BQ9BZI7 483 aaKnown RBP27.23■■□□□ 1.95
IRF3-227ENST00000600911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.23■■□□□ 1.95
IRF3-227ENST00000600911 GABPAQ06546 454 aa27.23■■□□□ 1.95
IRF3-227ENST00000600911 EAPPQ56P03 285 aaPredicted RBP27.23■■□□□ 1.95
IRF3-227ENST00000600911 AKNAD1Q5T1N1 836 aa27.23■■□□□ 1.95
IRF3-227ENST00000600911 USP50Q70EL3 339 aaPredicted RBP27.23■■□□□ 1.95
IRF3-227ENST00000600911 FAM83AQ86UY5 434 aa27.23■■□□□ 1.95
IRF3-227ENST00000600911 STAG1Q8WVM7 1258 aa27.23■■□□□ 1.95
IRF3-227ENST00000600911 ZKSCAN1P17029 563 aaPredicted RBP27.22■■□□□ 1.95
IRF3-227ENST00000600911 ZSCAN29Q8IWY8 852 aaPredicted RBP27.22■■□□□ 1.95
IRF3-227ENST00000600911 TCEANC2Q96MN5 208 aa27.22■■□□□ 1.95
IRF3-227ENST00000600911 IQCA1LA6NCM1 817 aa27.21■■□□□ 1.95
IRF3-227ENST00000600911 DEFB129Q9H1M3 183 aa27.21■■□□□ 1.95
IRF3-227ENST00000600911 B4E1Z4 1266 aa27.2■■□□□ 1.95
IRF3-227ENST00000600911 FGRP09769 529 aa27.2■■□□□ 1.95
IRF3-227ENST00000600911 ADM5C9JUS6 153 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 CASTP20810 708 aaKnown RBP27.19■■□□□ 1.94
IRF3-227ENST00000600911 C16orf86Q6ZW13 317 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 CYB5R4Q7L1T6 521 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 CHST3Q7LGC8 479 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 MB21D2Q8IYB1 491 aaPredicted RBP27.19■■□□□ 1.94
IRF3-227ENST00000600911 CSRNP1Q96S65 589 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 RBM19Q9Y4C8 960 aaKnown RBP27.19■■□□□ 1.94
IRF3-227ENST00000600911 SSC5DA1L4H1 1573 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 CD2BP2O95400 341 aaKnown RBP27.19■■□□□ 1.94
IRF3-227ENST00000600911 CDK8P49336 464 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 ANTXR2P58335 489 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 RRP12Q5JTH9 1297 aaKnown RBP27.19■■□□□ 1.94
IRF3-227ENST00000600911 NEK1Q96PY6 1258 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 ZSWIM6Q9HCJ5 1215 aa27.19■■□□□ 1.94
IRF3-227ENST00000600911 SHROOM1Q2M3G4 852 aaPredicted RBP27.18■■□□□ 1.94
IRF3-227ENST00000600911 NBPF12Q5TAG4 269 aaPredicted RBP27.18■■□□□ 1.94
IRF3-227ENST00000600911 MFSD6Q6ZSS7 791 aa27.18■■□□□ 1.94
IRF3-227ENST00000600911 TTC6Q86TZ1 520 aa27.18■■□□□ 1.94
IRF3-227ENST00000600911 APOBEC3FQ8IUX4 373 aaKnown RBP27.18■■□□□ 1.94
IRF3-227ENST00000600911 DHX36Q9H2U1 1008 aaKnown RBP27.18■■□□□ 1.94
IRF3-227ENST00000600911 PITPNM2Q9BZ72 1349 aa27.17■■□□□ 1.94
IRF3-227ENST00000600911 SHMT1P34896 483 aa27.17■■□□□ 1.94
IRF3-227ENST00000600911 RRP1BQ14684 758 aaKnown RBP27.17■■□□□ 1.94
IRF3-227ENST00000600911 LRRC2Q9BYS8 371 aa27.17■■□□□ 1.94
IRF3-227ENST00000600911 SERPINB13Q9UIV8 391 aa27.17■■□□□ 1.94
IRF3-227ENST00000600911 VEGFAP15692 232 aaPredicted RBP27.16■■□□□ 1.94
IRF3-227ENST00000600911 RASA1P20936 1047 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 METTL16Q86W50 562 aaKnown RBP27.16■■□□□ 1.94
IRF3-227ENST00000600911 AMOTL1Q8IY63 956 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 EHD4Q9H223 541 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 GPHNQ9NQX3 736 aaPredicted RBP27.16■■□□□ 1.94
IRF3-227ENST00000600911 PI4KBQ9UBF8 816 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 FZD1Q9UP38 647 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 GREB1LQ9C091 1923 aaPredicted RBP27.16■■□□□ 1.94
IRF3-227ENST00000600911 HLA-DOAP06340 250 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 TNNI2P48788 182 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 TNFAIP1Q13829 316 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 FAM47AQ5JRC9 791 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 MIGA2Q7L4E1 593 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 TM6SF1Q9BZW5 370 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 TOMM22Q9NS69 142 aa27.16■■□□□ 1.94
IRF3-227ENST00000600911 ORC4O43929 436 aa27.15■■□□□ 1.94
IRF3-227ENST00000600911 KDM4AO75164 1064 aa27.15■■□□□ 1.94
IRF3-227ENST00000600911 KRT32Q14532 448 aa27.15■■□□□ 1.94
IRF3-227ENST00000600911 NCOA7Q8NI08 942 aa27.15■■□□□ 1.94
IRF3-227ENST00000600911 RPS6KB1P23443 525 aa27.14■■□□□ 1.94
IRF3-227ENST00000600911 JAG1P78504 1218 aa27.14■■□□□ 1.94
IRF3-227ENST00000600911 EXOSC10Q01780 885 aaKnown RBP27.14■■□□□ 1.94
IRF3-227ENST00000600911 FMR1Q06787 632 aaKnown RBP eCLIP27.14■■□□□ 1.94
IRF3-227ENST00000600911 RUFY3Q7L099 469 aa27.14■■□□□ 1.94
IRF3-227ENST00000600911 DCPSQ96C86 337 aaKnown RBP27.14■■□□□ 1.94
IRF3-227ENST00000600911 TTC14Q96N46 770 aa27.14■■□□□ 1.94
IRF3-227ENST00000600911 GLIS2Q9BZE0 524 aaPredicted RBP27.14■■□□□ 1.94
IRF3-227ENST00000600911 ZSWIM5Q9P217 1185 aa27.14■■□□□ 1.94
IRF3-227ENST00000600911 USP48Q86UV5 1035 aa27.13■■□□□ 1.93
IRF3-227ENST00000600911 PNMA8AQ86V59 439 aaPredicted RBP27.13■■□□□ 1.93
IRF3-227ENST00000600911 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
IRF3-227ENST00000600911 NEK4P51957 841 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 MAP1SQ66K74 1059 aaPredicted RBP27.12■■□□□ 1.93
IRF3-227ENST00000600911 BLOC1S2Q6QNY1 142 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 ZKSCAN3Q9BRR0 538 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 LARP6Q9BRS8 491 aaKnown RBP27.12■■□□□ 1.93
IRF3-227ENST00000600911 RNF41Q9H4P4 317 aaPredicted RBP27.12■■□□□ 1.93
IRF3-227ENST00000600911 ATAD5Q96QE3 1844 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 RANBP6O60518 1105 aaKnown RBP27.12■■□□□ 1.93
IRF3-227ENST00000600911 NMT2O60551 498 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 PDE4BQ07343 736 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 RABEP1Q15276 862 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 KRT26Q7Z3Y9 468 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 SENP2Q9HC62 589 aa27.12■■□□□ 1.93
IRF3-227ENST00000600911 AKR1B1P15121 316 aa27.11■■□□□ 1.93
IRF3-227ENST00000600911 RALYLQ86SE5 291 aaKnown RBP27.11■■□□□ 1.93
IRF3-227ENST00000600911 FOXP4Q8IVH2 680 aaPredicted RBP27.11■■□□□ 1.93
IRF3-227ENST00000600911 CRACR2BQ8N4Y2 399 aaPredicted RBP27.11■■□□□ 1.93
IRF3-227ENST00000600911 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.11■■□□□ 1.93
IRF3-227ENST00000600911 MKNK2Q9HBH9 465 aa27.11■■□□□ 1.93
IRF3-227ENST00000600911 CLEC11AQ9Y240 323 aa27.11■■□□□ 1.93
IRF3-227ENST00000600911 PAPPA2Q9BXP8 1791 aa27.1■■□□□ 1.93
IRF3-227ENST00000600911 SLC3A2P08195 630 aaKnown RBP27.1■■□□□ 1.93
IRF3-227ENST00000600911 PSMA5P28066 241 aa27.1■■□□□ 1.93
IRF3-227ENST00000600911 MAP3K10Q02779 954 aa27.1■■□□□ 1.93
IRF3-227ENST00000600911 TATDN1Q6P1N9 297 aa27.1■■□□□ 1.93
IRF3-227ENST00000600911 DHX32Q7L7V1 743 aaKnown RBP27.1■■□□□ 1.93
IRF3-227ENST00000600911 CYP46A1Q9Y6A2 500 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms