RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RRP1BQ14684 758 aaKnown RBP27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 RIOK1Q9BRS2 568 aaKnown RBP27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 DHX36Q9H2U1 1008 aaKnown RBP27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 PAG1Q9NWQ8 432 aa27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 NAV1Q8NEY1 1877 aa27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 SLC9C2Q5TAH2 1124 aa27.11■■□□□ 1.93
GTF2F1-204ENST00000594965 PI4KBQ9UBF8 816 aa27.11■■□□□ 1.93
GTF2F1-204ENST00000594965 PALD1Q9ULE6 856 aa27.11■■□□□ 1.93
GTF2F1-204ENST00000594965 ZHX2Q9Y6X8 837 aa27.11■■□□□ 1.93
GTF2F1-204ENST00000594965 TCRBV5S4A2TA0A5A2 114 aa27.1■■□□□ 1.93
GTF2F1-204ENST00000594965 TAF1CQ15572 869 aaPredicted RBP27.1■■□□□ 1.93
GTF2F1-204ENST00000594965 METTL16Q86W50 562 aaKnown RBP27.1■■□□□ 1.93
GTF2F1-204ENST00000594965 PICK1Q9NRD5 415 aa27.1■■□□□ 1.93
GTF2F1-204ENST00000594965 ZNF532Q9HCE3 1301 aa27.1■■□□□ 1.93
GTF2F1-204ENST00000594965 CERS3Q8IU89 383 aa27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 DNAJC18Q9H819 358 aa27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 ZCCHC17Q9NP64 241 aaKnown RBP27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 SAP30BPQ9UHR5 308 aaKnown RBP27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 HERC5Q9UII4 1024 aaKnown RBP27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 AFG3L2Q9Y4W6 797 aa27.09■■□□□ 1.93
GTF2F1-204ENST00000594965 CXCL11O14625 94 aa27.08■■□□□ 1.93
GTF2F1-204ENST00000594965 SLFNL1Q499Z3 407 aa27.08■■□□□ 1.93
GTF2F1-204ENST00000594965 CCDC84Q86UT8 332 aaPredicted RBP27.08■■□□□ 1.93
GTF2F1-204ENST00000594965 MAGEB6P1A0A0J9YX57 407 aa27.07■■□□□ 1.92
GTF2F1-204ENST00000594965 ZFYVE28Q9HCC9 887 aa27.07■■□□□ 1.92
GTF2F1-204ENST00000594965 ECHDC1Q9NTX5 307 aa27.07■■□□□ 1.92
GTF2F1-204ENST00000594965 ZSWIM8A7E2V4 1837 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 CHGBP05060 677 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 ADD2P35612 726 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 CAP2P40123 477 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 USP5P45974 858 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 CAP1Q01518 475 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 ANKRD23Q86SG2 305 aa27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 FOXP4Q8IVH2 680 aaPredicted RBP27.06■■□□□ 1.92
GTF2F1-204ENST00000594965 A0A0G2JLL6 359 aaPredicted RBP27.05■■□□□ 1.92
GTF2F1-204ENST00000594965 SLC4A8Q2Y0W8 1093 aa27.05■■□□□ 1.92
GTF2F1-204ENST00000594965 GPAT2Q6NUI2 795 aa27.05■■□□□ 1.92
GTF2F1-204ENST00000594965 PRRT2Q7Z6L0 340 aaPredicted RBP27.05■■□□□ 1.92
GTF2F1-204ENST00000594965 LOC285556D6RIA3 1793 aa27.04■■□□□ 1.92
GTF2F1-204ENST00000594965 JAG1P78504 1218 aa27.04■■□□□ 1.92
GTF2F1-204ENST00000594965 SP3Q02447 781 aa27.04■■□□□ 1.92
GTF2F1-204ENST00000594965 TSHZ3Q63HK5 1081 aa27.04■■□□□ 1.92
GTF2F1-204ENST00000594965 BAZ2AQ9UIF9 1905 aaKnown RBP27.04■■□□□ 1.92
GTF2F1-204ENST00000594965 CCDC85CA6NKD9 419 aa27.03■■□□□ 1.92
GTF2F1-204ENST00000594965 TLR2O60603 784 aa27.03■■□□□ 1.92
GTF2F1-204ENST00000594965 PKN2Q16513 984 aaKnown RBP27.03■■□□□ 1.92
GTF2F1-204ENST00000594965 LCORLQ8N3X6 602 aa27.03■■□□□ 1.92
GTF2F1-204ENST00000594965 CD99L2Q8TCZ2 262 aa27.03■■□□□ 1.92
GTF2F1-204ENST00000594965 PDHXO00330 501 aa27.02■■□□□ 1.92
GTF2F1-204ENST00000594965 HLA-DOAP06340 250 aa27.02■■□□□ 1.92
GTF2F1-204ENST00000594965 ERO1AQ96HE7 468 aa27.02■■□□□ 1.92
GTF2F1-204ENST00000594965 ADGRA2Q96PE1 1338 aa27.01■■□□□ 1.91
GTF2F1-204ENST00000594965 SHROOM1Q2M3G4 852 aaPredicted RBP27.01■■□□□ 1.91
GTF2F1-204ENST00000594965 OTOP1Q7RTM1 612 aa27.01■■□□□ 1.91
GTF2F1-204ENST00000594965 CRACR2BQ8N4Y2 399 aaPredicted RBP27.01■■□□□ 1.91
GTF2F1-204ENST00000594965 OTUD7AQ8TE49 926 aaPredicted RBP27.01■■□□□ 1.91
GTF2F1-204ENST00000594965 TRIM75PA6NK02 468 aa27■■□□□ 1.91
GTF2F1-204ENST00000594965 HDAC1Q13547 482 aaPredicted RBP27■■□□□ 1.91
GTF2F1-204ENST00000594965 UBE3CQ15386 1083 aa27■■□□□ 1.91
GTF2F1-204ENST00000594965 DDX24Q9GZR7 859 aaKnown RBP eCLIP27■■□□□ 1.91
GTF2F1-204ENST00000594965 TRIM17Q9Y577 477 aa27■■□□□ 1.91
GTF2F1-204ENST00000594965 PLCD1P51178 756 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 FBXO46Q6PJ61 603 aaPredicted RBP26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 C17orf99Q6UX52 265 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 FASTKD5Q7L8L6 764 aaKnown RBP26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 SDR42E1Q8WUS8 393 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 GPATCH3Q96I76 525 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 CRNKL1Q9BZJ0 848 aaKnown RBP26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 EHD4Q9H223 541 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 ARMT1Q9H993 441 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 HPS5Q9UPZ3 1129 aa26.99■■□□□ 1.91
GTF2F1-204ENST00000594965 SPP2Q13103 211 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 GADL1Q6ZQY3 521 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 ZNF280CQ8ND82 737 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 TRIM34Q9BYJ4 488 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 DCP1AQ9NPI6 582 aaPredicted RBP26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 MYH8P13535 1937 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 MGAMO43451 1857 aa26.98■■□□□ 1.91
GTF2F1-204ENST00000594965 TTC41PQ6P2S7 1318 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 SALL3Q9BXA9 1300 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 USP17L5A8MUK1 530 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 MBD4O95243 580 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 GDF11O95390 407 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 EVX2Q03828 476 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 AAMPQ13685 434 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 TATDN1Q6P1N9 297 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 TTC6Q86TZ1 520 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 PI4K2BQ8TCG2 481 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 TBC1D2Q9BYX2 928 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 SERPINB13Q9UIV8 391 aa26.97■■□□□ 1.91
GTF2F1-204ENST00000594965 PRKAB2O43741 272 aa26.96■■□□□ 1.91
GTF2F1-204ENST00000594965 KBTBD3Q8NAB2 608 aa26.96■■□□□ 1.91
GTF2F1-204ENST00000594965 EXOC6Q8TAG9 804 aa26.96■■□□□ 1.91
GTF2F1-204ENST00000594965 PUS7LQ9H0K6 701 aaKnown RBP26.96■■□□□ 1.91
GTF2F1-204ENST00000594965 CPA4Q9UI42 421 aa26.96■■□□□ 1.91
GTF2F1-204ENST00000594965 ASNSP08243 561 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 CYP2C8P10632 490 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 ZSCAN25Q6NSZ9 544 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 GCC1Q96CN9 775 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms