RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
ERCC1-217ENST00000592905 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
ERCC1-217ENST00000592905 CRNKL1Q9BZJ0 848 aaKnown RBP18.28■□□□□ 0.52
ERCC1-217ENST00000592905 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
ERCC1-217ENST00000592905 PI4KBQ9UBF8 816 aa18.28■□□□□ 0.52
ERCC1-217ENST00000592905 ATAD5Q96QE3 1844 aa18.28■□□□□ 0.52
ERCC1-217ENST00000592905 LAMB1P07942 1786 aa18.27■□□□□ 0.52
ERCC1-217ENST00000592905 DOCK1Q14185 1865 aa18.27■□□□□ 0.52
ERCC1-217ENST00000592905 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
ERCC1-217ENST00000592905 TBC1D12O60347 775 aa18.27■□□□□ 0.52
ERCC1-217ENST00000592905 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
ERCC1-217ENST00000592905 RRP1BQ14684 758 aaKnown RBP18.27■□□□□ 0.52
ERCC1-217ENST00000592905 COL13A1Q5TAT6 717 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-217ENST00000592905 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
ERCC1-217ENST00000592905 IRF6O14896 467 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 TBC1D8O95759 1140 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 EVX2Q03828 476 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
ERCC1-217ENST00000592905 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-217ENST00000592905 SCYL3Q8IZE3 742 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-217ENST00000592905 MS4A4AQ96JQ5 239 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 PTPN18Q99952 460 aa18.26■□□□□ 0.51
ERCC1-217ENST00000592905 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
ERCC1-217ENST00000592905 CA12O43570 354 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 CTNND1O60716 968 aaKnown RBP18.25■□□□□ 0.51
ERCC1-217ENST00000592905 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 DNAJC18Q9H819 358 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 PHIPQ8WWQ0 1821 aa18.25■□□□□ 0.51
ERCC1-217ENST00000592905 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 CYP2D6P10635 497 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 PTPRAP18433 802 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 PLCD1P51178 756 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 GTF2A2P52657 109 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 INHBEP58166 350 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 PPATQ06203 517 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 PPIL2Q13356 520 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 CCL15Q16663 113 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 SHROOM1Q2M3G4 852 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 FOXP4Q8IVH2 680 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 BRI3BPQ8WY22 251 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 HERC5Q9UII4 1024 aaKnown RBP18.24■□□□□ 0.51
ERCC1-217ENST00000592905 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
ERCC1-217ENST00000592905 M0R2C6 588 aa18.23■□□□□ 0.51
ERCC1-217ENST00000592905 ZFYP08048 801 aaPredicted RBP18.23■□□□□ 0.51
ERCC1-217ENST00000592905 PDE4AP27815 886 aa18.23■□□□□ 0.51
ERCC1-217ENST00000592905 JAG1P78504 1218 aa18.23■□□□□ 0.51
ERCC1-217ENST00000592905 METTL16Q86W50 562 aaKnown RBP18.23■□□□□ 0.51
ERCC1-217ENST00000592905 APPBP2Q92624 585 aa18.23■□□□□ 0.51
ERCC1-217ENST00000592905 STRBPQ96SI9 672 aaKnown RBP18.23■□□□□ 0.51
ERCC1-217ENST00000592905 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
ERCC1-217ENST00000592905 TESPA1A2RU30 521 aaPredicted RBP18.22■□□□□ 0.51
ERCC1-217ENST00000592905 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 SMIM22K7EJ46 135 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 GDF11O95390 407 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 CAP2P40123 477 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
ERCC1-217ENST00000592905 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
ERCC1-217ENST00000592905 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
ERCC1-217ENST00000592905 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
ERCC1-217ENST00000592905 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.51
ERCC1-217ENST00000592905 PTPRFP10586 1907 aa18.21■□□□□ 0.51
ERCC1-217ENST00000592905 MYH8P13535 1937 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 GPAA1O43292 621 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 CETPP11597 493 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 LRRFIP1Q32MZ4 808 aaKnown RBP18.2■□□□□ 0.5
ERCC1-217ENST00000592905 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 KCNH4Q9UQ05 1017 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 AFG3L2Q9Y4W6 797 aa18.2■□□□□ 0.5
ERCC1-217ENST00000592905 TRIM75PA6NK02 468 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 USP17L21D6R901 530 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 OTUD7BQ6GQQ9 843 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 EHD4Q9H223 541 aa18.19■□□□□ 0.5
ERCC1-217ENST00000592905 BTBD19C9JJ37 291 aa18.18■□□□□ 0.5
ERCC1-217ENST00000592905 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
ERCC1-217ENST00000592905 SHMT1P34896 483 aa18.18■□□□□ 0.5
ERCC1-217ENST00000592905 MOGSQ13724 837 aa18.18■□□□□ 0.5
ERCC1-217ENST00000592905 TATDN1Q6P1N9 297 aa18.18■□□□□ 0.5
ERCC1-217ENST00000592905 SLC44A5Q8NCS7 719 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms